RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 NPIPA7E9PJI5 369 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 NPIPB9F8W1W9 429 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 SCDO00767 359 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 UGT2B17O75795 530 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 CAPNS1P04632 268 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 NPIPA8P0DM63 369 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 HPGDP15428 266 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 IL7RP16871 459 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 HOXB6P17509 224 aaKnown RBP19.05■□□□□ 0.64
CHD3-204ENST00000439235 PRKAR1BP31321 381 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 ERFP50548 548 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 SELENOWP63302 87 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 DMTNQ08495 405 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 EIPR1Q53HC9 387 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 ABHD17BQ5VST6 288 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 DHRS4L2Q6PKH6 230 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 LYPD8Q6UX82 237 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 NUP54Q7Z3B4 507 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 GPALPP1Q8IXQ4 340 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 PSMF1Q92530 271 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 TMCO6Q96DC7 493 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 TPD52L3Q96J77 140 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 HSH2DQ96JZ2 352 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 DOHHQ9BU89 302 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 PINK1Q9BXM7 581 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 ARMC7Q9H6L4 198 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 ZBTB20Q9HC78 741 aaPredicted RBP19.05■□□□□ 0.64
CHD3-204ENST00000439235 ANAPC2Q9UJX6 822 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 SLC13A4Q9UKG4 626 aa19.05■□□□□ 0.64
CHD3-204ENST00000439235 ZNF443Q9Y2A4 671 aaPredicted RBP19.05■□□□□ 0.64
CHD3-204ENST00000439235 ZNF354AO60765 605 aaPredicted RBP19.04■□□□□ 0.64
CHD3-204ENST00000439235 UGT2B11O75310 529 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 PRKD3O94806 890 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 NGFRP08138 427 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 NID1P14543 1247 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 CD247P20963 164 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 SOX3P41225 446 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 KCNJ5P48544 419 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 UCNP55089 124 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 RPP38P78345 283 aaKnown RBP19.04■□□□□ 0.64
CHD3-204ENST00000439235 NTRK2Q16620 822 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 ZSWIM7Q19AV6 140 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 DEFB109BQ30KR1 87 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 GRAMD1BQ3KR37 738 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 B3GNTL1Q67FW5 361 aaPredicted RBP19.04■□□□□ 0.64
CHD3-204ENST00000439235 FKBP9P1Q75LS8 142 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 VRK2Q86Y07 508 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 TMEM156Q8N614 296 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 ZNF614Q8N883 585 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 SMYD1Q8NB12 490 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 TTC9Q92623 222 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 PROX1Q92786 737 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 PYURFQ96I23 114 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 MAGIXQ9H6Y5 334 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.04■□□□□ 0.64
CHD3-204ENST00000439235 KLHL28Q9NXS3 571 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 V9GYQ6 96 aa19.04■□□□□ 0.64
CHD3-204ENST00000439235 SYT5O00445 386 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 CDK2AP1O14519 115 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 TP53I11O14683 189 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 MAN1A2O60476 641 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 ICOSLGO75144 302 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 ENTPD5O75356 428 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 OXSR1O95747 527 aaPredicted RBP19.03■□□□□ 0.64
CHD3-204ENST00000439235 TBXA2RP21731 343 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 FBXW4P57775 412 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 TLE3Q04726 772 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 ZNF791Q3KP31 576 aaPredicted RBP19.03■□□□□ 0.64
CHD3-204ENST00000439235 FAM98BQ52LJ0 330 aaKnown RBP19.03■□□□□ 0.64
CHD3-204ENST00000439235 IFI44LQ53G44 452 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 PDZK1Q5T2W1 519 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 RNF220Q5VTB9 566 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 ZFP1Q6P2D0 407 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 ENPP6Q6UWR7 440 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 UNQ6494/PRO21346Q6UXR6 183 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 HMGN2P46Q86SG4 172 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 APLFQ8IW19 511 aaPredicted RBP19.03■□□□□ 0.64
CHD3-204ENST00000439235 ADGRG5Q8IZF4 528 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 OR4C3Q8NH37 302 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 HGDQ93099 445 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 ZG16BQ96DA0 208 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 SLC47A1Q96FL8 570 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 HPF1Q9NWY4 346 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 KCNE5Q9UJ90 142 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 ABCG2Q9UNQ0 655 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 DTNAQ9Y4J8 743 aa19.03■□□□□ 0.64
CHD3-204ENST00000439235 H3BNH8 94 aa19.02■□□□□ 0.64
CHD3-204ENST00000439235 FKBP6O75344 327 aa19.02■□□□□ 0.64
CHD3-204ENST00000439235 OR6B1O95007 311 aa19.02■□□□□ 0.64
CHD3-204ENST00000439235 CASRP41180 1078 aa19.02■□□□□ 0.64
CHD3-204ENST00000439235 CLK3P49761 638 aaKnown RBP19.02■□□□□ 0.64
CHD3-204ENST00000439235 CHRNB3Q05901 458 aa19.02■□□□□ 0.64
CHD3-204ENST00000439235 FGFBP1Q14512 234 aa19.02■□□□□ 0.64
CHD3-204ENST00000439235 MAPK14Q16539 360 aa19.02■□□□□ 0.64
CHD3-204ENST00000439235 AGAP7PQ5VUJ5 663 aa19.02■□□□□ 0.64
CHD3-204ENST00000439235 ZNF836Q6ZNA1 936 aa19.02■□□□□ 0.64
CHD3-204ENST00000439235 CMIPQ8IY22 773 aa19.02■□□□□ 0.64
CHD3-204ENST00000439235 BEST3Q8N1M1 668 aa19.02■□□□□ 0.64
CHD3-204ENST00000439235 FAM86B1Q8N7N1 296 aa19.02■□□□□ 0.64
CHD3-204ENST00000439235 GPR32P1Q8NGA4 272 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms