RNA–Protein interactions for RNA: ENST00000437048.6

VPS53-204, Transcript of VPS53, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS53, Length 13,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-204ENST00000437048 WDR5P61964 334 aaKnown RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 ZNF852Q6ZMS4 543 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.82□□□□□ -1.32
VPS53-204ENST00000437048 SPACA1Q9HBV2 294 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 OR6C74A6NCV1 312 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 FOXE1O00358 373 aaPredicted RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 KCNK5O95279 499 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 SOX18P35713 384 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 RPL13AP40429 203 aaKnown RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 SLC6A9P48067 706 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 OR51G2Q8NGK0 314 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 SPACA7Q96KW9 195 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 UHRF1Q96T88 793 aaPredicted RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 LOC102725191A0A1B0GVB3 256 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 H2BFMP0C1H6 154 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 CR2P20023 1033 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 RPL35P42766 123 aaKnown RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 PPA1Q15181 289 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 YIF1BQ5BJH7 314 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 PSMG4Q5JS54 123 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 POGLUT1Q8NBL1 392 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 OR5B17Q8NGF7 314 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 OR5AK2Q8NH90 309 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 SPRYD4Q8WW59 207 aaPredicted RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 QTRT2Q9H974 415 aaKnown RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 NCDNQ9UBB6 729 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 MYOTQ9UBF9 498 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 ACP2P11117 423 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 ATP1B2P14415 290 aaPredicted RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 BDKRB1P46663 353 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 UBE2KP61086 200 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 NRG1Q02297 640 aaPredicted RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 AGBL4Q5VU57 503 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 NAXDQ8IW45 347 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 CNTN4Q8IWV2 1026 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 M1APQ8TC57 530 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 NKD1Q969G9 470 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 Q9Y3F1 56 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 STK17BO94768 372 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 G6PDP11413 515 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 BCKDHBP21953 392 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 F2RL1P55085 397 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 PLK5Q496M5 336 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 GGTA1PQ4G0N0 100 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 SSX7Q7RTT5 188 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 ZNF485Q8NCK3 441 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 FAM174AQ8TBP5 190 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 GLYATL2Q8WU03 294 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 HSD3B7Q9H2F3 369 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 TMEM82A0PJX8 343 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 MROH6A6NGR9 719 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 JUNP05412 331 aaKnown RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 C5AR1P21730 350 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 TSFMP43897 325 aaKnown RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 PTH2RP49190 550 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 CASP7P55210 303 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 RPS15AP62244 130 aaKnown RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 AGTRAPQ6RW13 159 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 NAA40Q86UY6 237 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 CERS5Q8N5B7 392 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 CLRN3Q8NCR9 226 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 TEPSINQ96N21 525 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 MS4A4EQ96PG1 132 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 PAPOLGQ9BWT3 736 aaKnown RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 COL2A1P02458 1487 aaPredicted RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 TMEM129A0AVI4 362 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 EIF2B1Q14232 305 aaKnown RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 GTDC1Q4AE62 458 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 TNFAIP8L2Q6P589 184 aaPredicted RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 COMTD1Q86VU5 262 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 CBARPQ8N350 705 aaPredicted RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 C2orf42Q9NWW7 574 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 MRC1P22897 1456 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 MSI1O43347 362 aaKnown RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 FMO6PO60774 539 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 LAP3P28838 519 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 SELENOWP63302 87 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 POU6F2P78424 691 aaPredicted RBP6.82□□□□□ -1.32
VPS53-204ENST00000437048 ZBTB8AQ96BR9 441 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 MYADMQ96S97 322 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 GPR83Q9NYM4 423 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 FZD1Q9UP38 647 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 PCDHA9Q9Y5H5 950 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 LAMB4A4D0S4 1761 aa6.82□□□□□ -1.32
VPS53-204ENST00000437048 NEMP2A6NFY4 417 aa6.81□□□□□ -1.32
VPS53-204ENST00000437048 GABARAPH6UMI1 98 aa6.81□□□□□ -1.32
VPS53-204ENST00000437048 CORO1AP31146 461 aaKnown RBP6.81□□□□□ -1.32
VPS53-204ENST00000437048 FXYD6P3P58550 94 aa6.81□□□□□ -1.32
VPS53-204ENST00000437048 SPANXN4Q5MJ08 99 aa6.81□□□□□ -1.32
VPS53-204ENST00000437048 CYP4X1Q8N118 509 aa6.81□□□□□ -1.32
VPS53-204ENST00000437048 KCNG3Q8TAE7 436 aa6.81□□□□□ -1.32
VPS53-204ENST00000437048 ZFP90Q8TF47 636 aa6.81□□□□□ -1.32
VPS53-204ENST00000437048 ALG8Q9BVK2 526 aa6.81□□□□□ -1.32
VPS53-204ENST00000437048 MCOLN1Q9GZU1 580 aa6.81□□□□□ -1.32
VPS53-204ENST00000437048 HHLA2Q9UM44 414 aa6.81□□□□□ -1.32
VPS53-204ENST00000437048 FAM155BO75949 473 aa6.81□□□□□ -1.32
VPS53-204ENST00000437048 AIFM1O95831 613 aa6.81□□□□□ -1.32
VPS53-204ENST00000437048 GNRHRP30968 328 aa6.81□□□□□ -1.32
VPS53-204ENST00000437048 FAM185AQ8N0U4 392 aa6.81□□□□□ -1.32
VPS53-204ENST00000437048 LRRC25Q8N386 305 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms