RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 LIPIQ6XZB0 460 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 MRPL21Q7Z2W9 205 aaKnown RBP14.97□□□□□ -0.01
PTPN13-204ENST00000436978 KIAA0907Q7Z7F0 614 aaPredicted RBP14.97□□□□□ -0.01
PTPN13-204ENST00000436978 BOLLQ8N9W6 283 aaKnown RBP14.97□□□□□ -0.01
PTPN13-204ENST00000436978 GPR26Q8NDV2 337 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 ZNF778Q96MU6 729 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 ZNF696Q9H7X3 374 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 TAAR2Q9P1P5 351 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 GPR160Q9UJ42 338 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 SMAD9O15198 467 aaKnown RBP14.97□□□□□ -0.01
PTPN13-204ENST00000436978 ATF4P18848 351 aaPredicted RBP14.97□□□□□ -0.01
PTPN13-204ENST00000436978 WBP2NLQ6ICG8 309 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 FEVQ99581 238 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 SMIM30A4D0T7 59 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 TRIM46Q7Z4K8 759 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 MCATQ8IVS2 390 aaKnown RBP14.96□□□□□ -0.01
PTPN13-204ENST00000436978 DNAJA3Q96EY1 480 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 PRRC1Q96M27 445 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 GSTO2Q9H4Y5 243 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 UBE2J1Q9Y385 318 aaPredicted RBP14.96□□□□□ -0.01
PTPN13-204ENST00000436978 XCR1P46094 333 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 CNN3Q15417 329 aaKnown RBP14.96□□□□□ -0.01
PTPN13-204ENST00000436978 HMGN2P46Q86SG4 172 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 NLGN4XQ8N0W4 816 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 ALG8Q9BVK2 526 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 SULT2B1O00204 365 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 AURKAO14965 403 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 SMAD6O43541 496 aaKnown RBP14.96□□□□□ -0.01
PTPN13-204ENST00000436978 LANCL3Q6ZV70 420 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 VTCN1Q7Z7D3 282 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 ZNF160Q9HCG1 818 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 POT1Q9NUX5 634 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 RDH16O75452 317 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 ATAD3CQ5T2N8 411 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 ALKAL1Q6UXT8 129 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 POGLUT1Q8NBL1 392 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 HDAC8Q9BY41 377 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 AOAHP28039 575 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 SFTPDP35247 375 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 CLDN2P57739 230 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 RTL6Q6ICC9 239 aa14.96□□□□□ -0.01
PTPN13-204ENST00000436978 ZNF551Q7Z340 670 aaPredicted RBP14.96□□□□□ -0.01
PTPN13-204ENST00000436978 TRBV11-1A0A0K0K1C0 115 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 LSM1O15116 133 aaKnown RBP14.96□□□□□ -0.02
PTPN13-204ENST00000436978 CHMP24386 653 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 S100PP25815 95 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 POU3F4P49335 361 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 BDH1Q02338 343 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 GSG1LQ6UXU4 331 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 ZNF595Q8IYB9 648 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 ADAMTS16Q8TE57 1224 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 TREX2Q9BQ50 279 aaPredicted RBP14.96□□□□□ -0.02
PTPN13-204ENST00000436978 ENKD1Q9H0I2 346 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 SYT4Q9H2B2 425 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 SLC39A1Q9NY26 324 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 GHRLQ9UBU3 117 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 INMT-MINDY4F8WBC2 141 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 ZFAND5O76080 213 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 PLATP00750 562 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 RAB3AP20336 220 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 HOXD9P28356 352 aaPredicted RBP14.96□□□□□ -0.02
PTPN13-204ENST00000436978 MAP2K3P46734 347 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 PPP1R35Q8TAP8 253 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 TMEM168Q9H0V1 697 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 MCM3APO60318 1980 aa14.96□□□□□ -0.02
PTPN13-204ENST00000436978 C17orf113A0A1B0GUU1 675 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 H3BQ06 376 aaPredicted RBP14.95□□□□□ -0.02
PTPN13-204ENST00000436978 CLIC3O95833 236 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 PPP1R3BQ86XI6 285 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 OR51T1Q8NGJ9 327 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 SLC46A2Q9BY10 475 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 ADAMTS6Q9UKP5 1117 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 RPS17P08708 135 aaKnown RBP14.95□□□□□ -0.02
PTPN13-204ENST00000436978 BMP2P12643 396 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 HLCSP50747 726 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 RRADP55042 308 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 TMEM236Q5W0B7 351 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 OR4K5Q8NGD3 323 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 INPP5EQ9NRR6 644 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 A0A1W2PPK0 400 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 ANKRD30BLA7E2S9 258 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 STSP08842 583 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 CD46P15529 392 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 WNT7BP56706 349 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 FAM205BPQ63HN1 556 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 CMTM1Q8IZ96 169 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 ANKK1Q8NFD2 765 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 RIMS3Q9UJD0 308 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 ZNF443Q9Y2A4 671 aaPredicted RBP14.95□□□□□ -0.02
PTPN13-204ENST00000436978 PAPPA2Q9BXP8 1791 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 GFRA2O00451 464 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 PRSS56P0CW18 603 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 CD79AP11912 226 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 OR5W2Q8NH69 310 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 NETO1Q8TDF5 533 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 C22orf15Q8WYQ4 148 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 ZNF285Q96NJ3 590 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 KLHL9Q9P2J3 617 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 ADAM29Q9UKF5 820 aa14.95□□□□□ -0.02
PTPN13-204ENST00000436978 ERVK-19Q9WJR5 959 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms