RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 C19orf53Q9UNZ5 99 aaPredicted RBP17.33■□□□□ 0.36
CLK1-205ENST00000434813 CMAHPQ9Y471 501 aa17.33■□□□□ 0.36
CLK1-205ENST00000434813 SCN3AQ9NY46 2000 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 PIP5K1CO60331 668 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 MSL3P1P0C860 447 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 POU3F3P20264 500 aaPredicted RBP17.32■□□□□ 0.36
CLK1-205ENST00000434813 RPS4Y1P22090 263 aaKnown RBP17.32■□□□□ 0.36
CLK1-205ENST00000434813 GABRA5P31644 462 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 ACSL1P33121 698 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 ZNF136P52737 540 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 RPS25P62851 125 aaKnown RBP17.32■□□□□ 0.36
CLK1-205ENST00000434813 ALG11Q2TAA5 492 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 C22orf42Q6IC83 251 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 OR10G6Q8NH81 332 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 CHAC2Q8WUX2 184 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 RSC1A1Q92681 617 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 KCTD7Q96MP8 289 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 SDF2Q99470 211 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 ZFYVE21Q9BQ24 234 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 ARHGAP9Q9BRR9 750 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 C14orf119Q9NWQ9 140 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 NLGN3Q9NZ94 848 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 SLC7A7Q9UM01 511 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 LRP4O75096 1905 aa17.32■□□□□ 0.36
CLK1-205ENST00000434813 CENPVL1A0A0U1RR11 272 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 OR6C74A6NCV1 312 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 TMEM221A6NGB7 291 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 SLC30A4O14863 429 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 DNAJB6O75190 326 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 POLR2CP19387 275 aaPredicted RBP17.31■□□□□ 0.36
CLK1-205ENST00000434813 SLC1A3P43003 542 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 TPTEP56180 551 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 SRP54P61011 504 aaKnown RBP17.31■□□□□ 0.36
CLK1-205ENST00000434813 SELENBP1Q13228 472 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 SHFQ7M4L6 423 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 RANBP3LQ86VV4 465 aaPredicted RBP17.31■□□□□ 0.36
CLK1-205ENST00000434813 SLC44A3Q8N4M1 653 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 FAM181AQ8N9Y4 354 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 GATAD2BQ8WXI9 593 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 TMEM203Q969S6 136 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 TMEM74BQ9NUR3 256 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 TBC1D24Q9ULP9 559 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 SATB2Q9UPW6 733 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 YARS2Q9Y2Z4 477 aaKnown RBP17.31■□□□□ 0.36
CLK1-205ENST00000434813 ATP1B1P05026 303 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 NDUFV2P19404 249 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 SLC9A3P48764 834 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 TMED10P49755 219 aaKnown RBP17.31■□□□□ 0.36
CLK1-205ENST00000434813 MRPS21P82921 87 aaKnown RBP17.31■□□□□ 0.36
CLK1-205ENST00000434813 HNRNPA0Q13151 305 aaKnown RBP17.31■□□□□ 0.36
CLK1-205ENST00000434813 ZNF79Q15937 498 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 TRMT12Q53H54 448 aaKnown RBP17.31■□□□□ 0.36
CLK1-205ENST00000434813 CD200R1LQ6Q8B3 271 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 KIAA1324Q6UXG2 1013 aaKnown RBP17.31■□□□□ 0.36
CLK1-205ENST00000434813 AKAP14Q86UN6 197 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 ZNF619Q8N2I2 560 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 OR2T33Q8NG76 320 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 TPK1Q9H3S4 243 aa17.31■□□□□ 0.36
CLK1-205ENST00000434813 FANCMQ8IYD8 2048 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 COL4A2P08572 1712 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 A0A087WV62 115 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 LOC105369274A0A096LPK9 316 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 LOC102723532A0A0G2JNH3 316 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 CH25HO95992 272 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 IGHA1P01876 353 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 DBIP07108 87 aaKnown RBP17.3■□□□□ 0.36
CLK1-205ENST00000434813 FGF9P31371 208 aaPredicted RBP17.3■□□□□ 0.36
CLK1-205ENST00000434813 TGM4P49221 684 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 MXD1Q05195 221 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 DSG2Q14126 1118 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 CCNJQ5T5M9 372 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 NXNL2Q5VZ03 156 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 TRIM48Q8IWZ4 208 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 OR4N4Q8N0Y3 316 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 ZFPM2Q8WW38 1151 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 RERGQ96A58 199 aaPredicted RBP17.3■□□□□ 0.36
CLK1-205ENST00000434813 SRRQ9GZT4 340 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 DUSP22Q9NRW4 184 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 PLEKHB1Q9UF11 243 aaPredicted RBP17.3■□□□□ 0.36
CLK1-205ENST00000434813 EXOGQ9Y2C4 368 aaKnown RBP17.3■□□□□ 0.36
CLK1-205ENST00000434813 ZNF860A6NHJ4 632 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 CDC42EP2O14613 210 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 STX11O75558 287 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 HMGN1P05114 100 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 IFI6P09912 130 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 HTR1FP30939 366 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 GCGRP47871 477 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 YPEL5P62699 121 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 GPR68Q15743 365 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 DCST2Q5T1A1 773 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 Q7L0L9 218 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 RNF44Q7L0R7 432 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 GALNT12Q8IXK2 581 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 OR8H2Q8N162 312 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 DEFB123Q8N688 67 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 BRIX1Q8TDN6 353 aaKnown RBP17.3■□□□□ 0.36
CLK1-205ENST00000434813 C1GALT1C1Q96EU7 318 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 GAS2L1Q99501 681 aaPredicted RBP17.3■□□□□ 0.36
CLK1-205ENST00000434813 PRSS27Q9BQR3 290 aa17.3■□□□□ 0.36
CLK1-205ENST00000434813 JAM3Q9BX67 310 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms