RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 A6NCN8 305 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 FABP12A6NFH5 140 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 LRRC72A6NJI9 287 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 C2orf74A8MZ97 194 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 PLOD3O60568 738 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 RCBTB2O95199 551 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 RASGRP1O95267 797 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 ZIC2O95409 532 aaPredicted RBP9.71□□□□□ -0.85
CD44-210ENST00000434472 ATP1B1P05026 303 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 MSL3P1P0C860 447 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 IL7P13232 177 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 EN2P19622 333 aaPredicted RBP9.71□□□□□ -0.85
CD44-210ENST00000434472 RPS4Y1P22090 263 aaKnown RBP9.71□□□□□ -0.85
CD44-210ENST00000434472 AKT2P31751 481 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 ATP6V1E1P36543 226 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 SRP54P61011 504 aaKnown RBP9.71□□□□□ -0.85
CD44-210ENST00000434472 SIM1P81133 766 aaPredicted RBP9.71□□□□□ -0.85
CD44-210ENST00000434472 MRPS21P82921 87 aaKnown RBP9.71□□□□□ -0.85
CD44-210ENST00000434472 MXD1Q05195 221 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 ASAH1Q13510 395 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 GPR50Q13585 617 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 LRIT3Q3SXY7 679 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 GLYR1Q49A26 553 aaPredicted RBP9.71□□□□□ -0.85
CD44-210ENST00000434472 DEFB134Q4QY38 66 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 FLYWCH1Q4VC44 716 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 CLEC12AQ5QGZ9 265 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 DCST2Q5T1A1 773 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 PDZK1Q5T2W1 519 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 MZT2AQ6P582 158 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 CXXC5Q7LFL8 322 aaKnown RBP9.71□□□□□ -0.85
CD44-210ENST00000434472 RAB43Q86YS6 212 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 LAX1Q8IWV1 398 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 ZNF485Q8NCK3 441 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 TMEM255BQ8WV15 326 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 TM9SF4Q92544 642 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 TSACCQ96A04 125 aaPredicted RBP9.71□□□□□ -0.85
CD44-210ENST00000434472 BMFQ96LC9 184 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 SLC22A4Q9H015 551 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 TPK1Q9H3S4 243 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 ABCB9Q9NP78 766 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 C14orf119Q9NWQ9 140 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 TNFRSF10DQ9UBN6 386 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 ADAM30Q9UKF2 790 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 POLHQ9Y253 713 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 HS3ST3A1Q9Y663 406 aa9.71□□□□□ -0.85
CD44-210ENST00000434472 MYO10Q9HD67 2058 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 A0A1W2PQL4 384 aaPredicted RBP9.71□□□□□ -0.86
CD44-210ENST00000434472 OR6C74A6NCV1 312 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 P2RX6O15547 441 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 SEC14L5O43304 696 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 GPR75O95800 540 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 THY1P04216 161 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 KRT8P05787 483 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 GUSBP08236 651 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 CLEC2LP0C7M8 214 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 TRAPPC2P0DI81 140 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 TRAPPC2BP0DI82 140 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 NID1P14543 1247 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 BMP7P18075 431 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 POLR2CP19387 275 aaPredicted RBP9.71□□□□□ -0.86
CD44-210ENST00000434472 CD53P19397 219 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 DRD1P21728 446 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 GPR4P46093 362 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 RPS5P46782 204 aaKnown RBP9.71□□□□□ -0.86
CD44-210ENST00000434472 CAPZA2P47755 286 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 RNF144AP50876 292 aaPredicted RBP9.71□□□□□ -0.86
CD44-210ENST00000434472 ZNF136P52737 540 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 POU6F2P78424 691 aaPredicted RBP9.71□□□□□ -0.86
CD44-210ENST00000434472 HOXC5Q00444 222 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 ILF3Q12906 894 aaKnown RBP eCLIP9.71□□□□□ -0.86
CD44-210ENST00000434472 GPR68Q15743 365 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 KCNJ8Q15842 424 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 ZNF79Q15937 498 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 C9orf50Q5SZB4 431 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 SLC30A6Q6NXT4 461 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 MEX3DQ86XN8 651 aaKnown RBP9.71□□□□□ -0.86
CD44-210ENST00000434472 UBQLNLQ8IYU4 475 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 SLC43A2Q8N370 569 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 COX18Q8N8Q8 333 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 TMEM203Q969S6 136 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 MRPL38Q96DV4 380 aaKnown RBP9.71□□□□□ -0.86
CD44-210ENST00000434472 DIRAS2Q96HU8 199 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 SAMD8Q96LT4 415 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 HS6ST2Q96MM7 605 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 FCRL4Q96PJ5 515 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 CD180Q99467 661 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 ZNF559Q9BR84 538 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 RPP25Q9BUL9 199 aaKnown RBP9.71□□□□□ -0.86
CD44-210ENST00000434472 KATNB1Q9BVA0 655 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 MIR1-1HGQ9H1L0 117 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 MIXL1Q9H2W2 232 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 C6orf106Q9H6K1 298 aaPredicted RBP9.71□□□□□ -0.86
CD44-210ENST00000434472 INPP5EQ9NRR6 644 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 POT1Q9NUX5 634 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 MUTYHQ9UIF7 546 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 ZNF223Q9UK11 482 aaPredicted RBP9.71□□□□□ -0.86
CD44-210ENST00000434472 CBLCQ9ULV8 474 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 BAIAP2Q9UQB8 552 aa9.71□□□□□ -0.86
CD44-210ENST00000434472 NINQ8N4C6 2090 aa9.7□□□□□ -0.86
CD44-210ENST00000434472 ATG2AQ2TAZ0 1938 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms