RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 NT5EP21589 574 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 CD40LGP29965 261 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 ETV5P41161 510 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 FASLGP48023 281 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 GABRA4P48169 554 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 ETV1P50549 477 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 IGLV3-21P80748 117 aaPredicted RBP12.97□□□□□ -0.33
HOXC4-202ENST00000430889 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.97□□□□□ -0.33
HOXC4-202ENST00000430889 MAP4K2Q12851 820 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 EXOSC7Q15024 291 aaKnown RBP12.97□□□□□ -0.33
HOXC4-202ENST00000430889 SNAPC1Q16533 368 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 MINDY4Q4G0A6 757 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 AADACL4Q5VUY2 407 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 TUBA3EQ6PEY2 450 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 SLC36A4Q6YBV0 504 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 WDR88Q6ZMY6 472 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 GDPGP1Q6ZNW5 385 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 NRMQ8IXM6 262 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 SLC34A3Q8N130 599 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 PIK3R3Q92569 461 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 CLDN16Q9Y5I7 305 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 DNAH14Q0VDD8 3507 aa12.97□□□□□ -0.33
HOXC4-202ENST00000430889 TP53BP1Q12888 1972 aaPredicted RBP12.97□□□□□ -0.33
HOXC4-202ENST00000430889 TGFBR3LH3BV60 316 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 TAF4O00268 1085 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 PEX12O00623 359 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 CDC42EP2O14613 210 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 SURF4O15260 269 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 FOXS1O43638 330 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 OCM2P0CE71 109 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 OCMP0CE72 109 aaPredicted RBP12.96□□□□□ -0.33
HOXC4-202ENST00000430889 GNSP15586 552 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 IFNA8P32881 189 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 ETV6P41212 452 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 SOX3P41225 446 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 PPP5CP53041 499 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 MAZP56270 477 aaKnown RBP12.96□□□□□ -0.33
HOXC4-202ENST00000430889 RAB40BQ12829 278 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 FZD5Q13467 585 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 GPR68Q15743 365 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 DEFB110Q30KQ9 67 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 MRPL2Q5T653 305 aaKnown RBP12.96□□□□□ -0.33
HOXC4-202ENST00000430889 ZAR1Q86SH2 424 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 MCATQ8IVS2 390 aaKnown RBP12.96□□□□□ -0.33
HOXC4-202ENST00000430889 FAM160A2Q8N612 972 aaPredicted RBP12.96□□□□□ -0.33
HOXC4-202ENST00000430889 ZNF485Q8NCK3 441 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 OR9A4Q8NGU2 314 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 OSTF1Q92882 214 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 ABTB1Q969K4 478 aaPredicted RBP12.96□□□□□ -0.33
HOXC4-202ENST00000430889 TRMT61AQ96FX7 289 aaKnown RBP12.96□□□□□ -0.33
HOXC4-202ENST00000430889 LMF2Q9BU23 707 aaKnown RBP12.96□□□□□ -0.33
HOXC4-202ENST00000430889 PHF7Q9BWX1 381 aaPredicted RBP12.96□□□□□ -0.33
HOXC4-202ENST00000430889 MED17Q9NVC6 651 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 SEC14L4Q9UDX3 406 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 SLC7A7Q9UM01 511 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 CDH10Q9Y6N8 788 aa12.96□□□□□ -0.33
HOXC4-202ENST00000430889 TMEM129A0AVI4 362 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 GXYLT2A0PJZ3 443 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 IRGMA1A4Y4 181 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 TRAPPC13A5PLN9 417 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 B4DGG1 531 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 CHST10O43529 356 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 CSF2P04141 144 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 TGM1P22735 817 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 GPR4P46093 362 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 FXYD6P3P58550 94 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 PRKCDQ05655 676 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 ATP1A4Q13733 1029 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 PGGHGQ32M88 737 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 KLHL22Q53GT1 634 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 C17orf82Q86X59 251 aaPredicted RBP12.96□□□□□ -0.34
HOXC4-202ENST00000430889 SNX29P2Q8IUI4 249 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 PHC2Q8IXK0 858 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 COX18Q8N8Q8 333 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 AVL9Q8NBF6 648 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 MINDY2Q8NBR6 621 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 ANKK1Q8NFD2 765 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 RLN3Q8WXF3 142 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 SLC38A2Q96QD8 506 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 CCDC3Q9BQI4 270 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 SIAEQ9HAT2 523 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 ISYNA1Q9NPH2 558 aa12.96□□□□□ -0.34
HOXC4-202ENST00000430889 PCDH15Q96QU1 1955 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 CEP192Q8TEP8 1941 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 LILRA5A6NI73 299 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 KPNA4O00629 521 aaPredicted RBP12.95□□□□□ -0.34
HOXC4-202ENST00000430889 HRO43593 1189 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 ZNF217O75362 1048 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 ZGLP1P0C6A0 271 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 NME1P15531 152 aaKnown RBP12.95□□□□□ -0.34
HOXC4-202ENST00000430889 CPEP16870 476 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 CAPZBP47756 277 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 PSMD7P51665 324 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 RPS3AP61247 264 aaKnown RBP12.95□□□□□ -0.34
HOXC4-202ENST00000430889 POU6F2P78424 691 aaPredicted RBP12.95□□□□□ -0.34
HOXC4-202ENST00000430889 BNC1Q01954 994 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 OR1Q1Q15612 314 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 NIPAL1Q6NVV3 410 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 ARMC6Q6NXE6 501 aa12.95□□□□□ -0.34
HOXC4-202ENST00000430889 RANBP3LQ86VV4 465 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms