RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 DUSP18Q8NEJ0 188 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 OR6T1Q8NGN1 323 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 ACOT11Q8WXI4 607 aaPredicted RBP8.14□□□□□ -1.11
GABPB1-205ENST00000429662 SMG7Q92540 1137 aaKnown RBP8.14□□□□□ -1.11
GABPB1-205ENST00000429662 CLDN23Q96B33 292 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF707Q96C28 371 aaPredicted RBP8.14□□□□□ -1.11
GABPB1-205ENST00000429662 TRMT61AQ96FX7 289 aaKnown RBP8.14□□□□□ -1.11
GABPB1-205ENST00000429662 FERD3LQ96RJ6 166 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 KATNB1Q9BVA0 655 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 GON7Q9BXV9 100 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 TEX101Q9BY14 249 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 MIXL1Q9H2W2 232 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 TPK1Q9H3S4 243 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 NIPAL2Q9H841 368 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 SFXN1Q9H9B4 322 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 TIGARQ9NQ88 270 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 INPP5EQ9NRR6 644 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 SEMA4GQ9NTN9 838 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 TEX10Q9NXF1 929 aaPredicted RBP8.14□□□□□ -1.11
GABPB1-205ENST00000429662 PLAGL1Q9UM63 463 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF232Q9UNY5 417 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 CLCA2Q9UQC9 943 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 TMEM98Q9Y2Y6 226 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 MRPS23Q9Y3D9 190 aaKnown RBP8.14□□□□□ -1.11
GABPB1-205ENST00000429662 HEBP2Q9Y5Z4 205 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 SDK1Q7Z5N4 2213 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 MYO18BQ8IUG5 2567 aa8.14□□□□□ -1.11
GABPB1-205ENST00000429662 PCM1Q15154 2024 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 A0A087WUU8 490 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 TBC1D3KA0A087X1G2 549 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 PRAMEF27A3QJZ7 478 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 TBC1D3BA6NDS4 549 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 TBC1D3FA6NER0 549 aaPredicted RBP8.13□□□□□ -1.11
GABPB1-205ENST00000429662 B4DXG7 233 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 SGK494L7N484 410 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 CASKO14936 926 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 ARHGEF9O43307 516 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 LRP3O75074 770 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 IGHA1P01876 353 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 CHRM4P08173 479 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 SLC2A2P11168 524 aaPredicted RBP8.13□□□□□ -1.11
GABPB1-205ENST00000429662 CMPK1P30085 196 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 PKLRP30613 574 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 OPRD1P41143 372 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 P2RY2P41231 377 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 SLC1A3P43003 542 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 MAP2K3P46734 347 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 MAN2A2P49641 1150 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 SLAMF1Q13291 335 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 PDGFRLQ15198 375 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 SF3A2Q15428 464 aaKnown RBP8.13□□□□□ -1.11
GABPB1-205ENST00000429662 CSRP2Q16527 193 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 EIPR1Q53HC9 387 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF362Q5T0B9 420 aaPredicted RBP8.13□□□□□ -1.11
GABPB1-205ENST00000429662 AADACL4Q5VUY2 407 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 NXNL2Q5VZ03 156 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 BICRALQ6AI39 1079 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 TBC1D3GQ6DHY5 549 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 THOC7Q6I9Y2 204 aaKnown RBP8.13□□□□□ -1.11
GABPB1-205ENST00000429662 RPL13AP3Q6NVV1 102 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 SLC48A1Q6P1K1 146 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 ABHD17CQ6PCB6 329 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 SZRD1Q7Z422 152 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 KIF18BQ86Y91 864 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 GALNT12Q8IXK2 581 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 OR2L5Q8NG80 312 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 GATAD2BQ8WXI9 593 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 SLC9A6Q92581 669 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 PMM1Q92871 262 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 OTULINQ96BN8 352 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 BBC3Q96PG8 261 aaPredicted RBP8.13□□□□□ -1.11
GABPB1-205ENST00000429662 NEDD4LQ96PU5 975 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 ACTRT3Q9BYD9 372 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 C11orf54Q9H0W9 315 aaPredicted RBP8.13□□□□□ -1.11
GABPB1-205ENST00000429662 ABCG4Q9H172 646 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 KCNN2Q9H2S1 579 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 FN3KQ9H479 309 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 MRPS30Q9NP92 439 aaKnown RBP8.13□□□□□ -1.11
GABPB1-205ENST00000429662 DIABLOQ9NR28 239 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 PHPT1Q9NRX4 125 aaPredicted RBP8.13□□□□□ -1.11
GABPB1-205ENST00000429662 RBFOX1Q9NWB1 397 aaKnown RBP8.13□□□□□ -1.11
GABPB1-205ENST00000429662 OBP2AQ9NY56 170 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 IL20Q9NYY1 176 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 SLC23A2Q9UGH3 650 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 RBMX2Q9Y388 322 aaKnown RBP8.13□□□□□ -1.11
GABPB1-205ENST00000429662 ZNF780BQ9Y6R6 833 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 ATMQ13315 3056 aa8.13□□□□□ -1.11
GABPB1-205ENST00000429662 COL12A1Q99715 3063 aa8.12□□□□□ -1.11
GABPB1-205ENST00000429662 FEZF1A0PJY2 475 aa8.12□□□□□ -1.11
GABPB1-205ENST00000429662 PRRT4C9JH25 899 aa8.12□□□□□ -1.11
GABPB1-205ENST00000429662 WWP2O00308 870 aa8.12□□□□□ -1.11
GABPB1-205ENST00000429662 SURF4O15260 269 aa8.12□□□□□ -1.11
GABPB1-205ENST00000429662 ORC5O43913 435 aa8.12□□□□□ -1.11
GABPB1-205ENST00000429662 SLC43A1O75387 559 aa8.12□□□□□ -1.11
GABPB1-205ENST00000429662 EPPINO95925 133 aa8.12□□□□□ -1.11
GABPB1-205ENST00000429662 PCCBP05166 539 aa8.12□□□□□ -1.11
GABPB1-205ENST00000429662 HMGN2P05204 90 aaKnown RBP8.12□□□□□ -1.11
GABPB1-205ENST00000429662 LIMS3P0CW19 117 aa8.12□□□□□ -1.11
GABPB1-205ENST00000429662 LIMS4P0CW20 117 aa8.12□□□□□ -1.11
GABPB1-205ENST00000429662 F3P13726 295 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms