RNA–Protein interactions for RNA: ENST00000429374.5

HDAC10-204, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-204ENST00000429374 LCN1P31025 176 aa17.59■□□□□ 0.41
HDAC10-204ENST00000429374 SH3BGRP55822 239 aaPredicted RBP17.59■□□□□ 0.41
HDAC10-204ENST00000429374 MRPL2Q5T653 305 aaKnown RBP17.59■□□□□ 0.41
HDAC10-204ENST00000429374 FIGNL1Q6PIW4 674 aa17.59■□□□□ 0.41
HDAC10-204ENST00000429374 PLEKHM3Q6ZWE6 761 aa17.59■□□□□ 0.41
HDAC10-204ENST00000429374 BMP8AQ7Z5Y6 402 aa17.59■□□□□ 0.41
HDAC10-204ENST00000429374 ZER1Q7Z7L7 766 aa17.59■□□□□ 0.41
HDAC10-204ENST00000429374 TMEM151BQ8IW70 566 aa17.59■□□□□ 0.41
HDAC10-204ENST00000429374 RCBTB1Q8NDN9 531 aa17.59■□□□□ 0.41
HDAC10-204ENST00000429374 FAM81AQ8TBF8 368 aa17.59■□□□□ 0.41
HDAC10-204ENST00000429374 SENP5Q96HI0 755 aaPredicted RBP17.59■□□□□ 0.41
HDAC10-204ENST00000429374 CNPPD1Q9BV87 410 aa17.59■□□□□ 0.41
HDAC10-204ENST00000429374 YIPF2Q9BWQ6 316 aa17.59■□□□□ 0.41
HDAC10-204ENST00000429374 POLR1BQ9H9Y6 1135 aa17.59■□□□□ 0.41
HDAC10-204ENST00000429374 FSCN3Q9NQT6 498 aa17.59■□□□□ 0.41
HDAC10-204ENST00000429374 SEMA4GQ9NTN9 838 aa17.59■□□□□ 0.41
HDAC10-204ENST00000429374 ATXN7L1Q9ULK2 861 aaPredicted RBP17.59■□□□□ 0.41
HDAC10-204ENST00000429374 HRKO00198 91 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 OR6B1O95007 311 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 SP9P0CG40 484 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 MMP11P24347 488 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 PPICP45877 212 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 SLC37A1P57057 533 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 DCAF7P61962 342 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 TRA2AQ13595 282 aaKnown RBP eCLIP17.58■□□□□ 0.41
HDAC10-204ENST00000429374 ARHGAP40Q5TG30 622 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 SLX4IPQ5VYV7 408 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 RRM2BQ7LG56 351 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 RNF113BQ8IZP6 322 aaKnown RBP17.58■□□□□ 0.41
HDAC10-204ENST00000429374 OR14A16Q8NHC5 309 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 IFI44Q8TCB0 444 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 APH1BQ8WW43 257 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 DAZLQ92904 295 aaKnown RBP17.58■□□□□ 0.41
HDAC10-204ENST00000429374 SLC41A3Q96GZ6 507 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 ZNF559Q9BR84 538 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 HOXD1Q9GZZ0 328 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 KRCC1Q9NPI7 259 aaPredicted RBP17.58■□□□□ 0.41
HDAC10-204ENST00000429374 IMPAD1Q9NX62 359 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 CBLCQ9ULV8 474 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 PCDHGB2Q9Y5G2 931 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 COMMD3-BMI1R4GMX3 469 aa17.58■□□□□ 0.41
HDAC10-204ENST00000429374 TRAPPC13A5PLN9 417 aa17.58■□□□□ 0.4
HDAC10-204ENST00000429374 CPSF4LA6NMK7 179 aaKnown RBP17.58■□□□□ 0.4
HDAC10-204ENST00000429374 PEX12O00623 359 aa17.58■□□□□ 0.4
HDAC10-204ENST00000429374 IGKV3-11P04433 115 aa17.58■□□□□ 0.4
HDAC10-204ENST00000429374 HTR1AP08908 422 aa17.58■□□□□ 0.4
HDAC10-204ENST00000429374 GSSP48637 474 aa17.58■□□□□ 0.4
HDAC10-204ENST00000429374 PGDP52209 483 aa17.58■□□□□ 0.4
HDAC10-204ENST00000429374 ATP12AP54707 1039 aa17.58■□□□□ 0.4
HDAC10-204ENST00000429374 TSPAN31Q12999 210 aa17.58■□□□□ 0.4
HDAC10-204ENST00000429374 COL9A2Q14055 689 aaPredicted RBP17.58■□□□□ 0.4
HDAC10-204ENST00000429374 NPSR1Q6W5P4 371 aa17.58■□□□□ 0.4
HDAC10-204ENST00000429374 GDF7Q7Z4P5 450 aa17.58■□□□□ 0.4
HDAC10-204ENST00000429374 ZNF420Q8TAQ5 688 aaPredicted RBP17.58■□□□□ 0.4
HDAC10-204ENST00000429374 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.58■□□□□ 0.4
HDAC10-204ENST00000429374 ZNF226Q9NYT6 803 aa17.58■□□□□ 0.4
HDAC10-204ENST00000429374 RARRES3Q9UL19 164 aa17.58■□□□□ 0.4
HDAC10-204ENST00000429374 CLCA3PQ9Y6N3 262 aa17.58■□□□□ 0.4
HDAC10-204ENST00000429374 LAMA1P25391 3075 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 PATE3B3GLJ2 98 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 H3BSA7 217 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 NTN3O00634 580 aaPredicted RBP17.57■□□□□ 0.4
HDAC10-204ENST00000429374 POLR1CO15160 346 aaPredicted RBP17.57■□□□□ 0.4
HDAC10-204ENST00000429374 FRS3O43559 492 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 TP53P04637 393 aaPredicted RBP17.57■□□□□ 0.4
HDAC10-204ENST00000429374 ITIH1P19827 911 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 FMO3P31513 532 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 SNRPGP62308 76 aaKnown RBP17.57■□□□□ 0.4
HDAC10-204ENST00000429374 PSPHP78330 225 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 MVKQ03426 396 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 PMS2P3Q13401 168 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 C12orf73Q69YU5 71 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 XAF1Q6GPH4 301 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 ZNF613Q6PF04 617 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 DBX2Q6ZNG2 339 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 MBOAT2Q6ZWT7 520 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 PRSS48Q7RTY5 328 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 SLITRK4Q8IW52 837 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 SVOPQ8N4V2 548 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 PIGXQ8TBF5 258 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 TMIGD2Q96BF3 282 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 MYCBPQ99417 103 aaPredicted RBP17.57■□□□□ 0.4
HDAC10-204ENST00000429374 RASSF1Q9NS23 344 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 PAK1IP1Q9NWT1 392 aaPredicted RBP17.57■□□□□ 0.4
HDAC10-204ENST00000429374 SIDT1Q9NXL6 827 aaKnown RBP17.57■□□□□ 0.4
HDAC10-204ENST00000429374 RSL24D1Q9UHA3 163 aaKnown RBP17.57■□□□□ 0.4
HDAC10-204ENST00000429374 DTX4Q9Y2E6 619 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 PCDHGA5Q9Y5G8 931 aa17.57■□□□□ 0.4
HDAC10-204ENST00000429374 CENPVL1A0A0U1RR11 272 aa17.56■□□□□ 0.4
HDAC10-204ENST00000429374 OR2W5A6NFC9 320 aa17.56■□□□□ 0.4
HDAC10-204ENST00000429374 PTGES3LE9PB15 166 aa17.56■□□□□ 0.4
HDAC10-204ENST00000429374 XPNPEP2O43895 674 aa17.56■□□□□ 0.4
HDAC10-204ENST00000429374 FAM20BO75063 409 aa17.56■□□□□ 0.4
HDAC10-204ENST00000429374 SEC14L2O76054 403 aa17.56■□□□□ 0.4
HDAC10-204ENST00000429374 IGKV1D-16P01601 117 aa17.56■□□□□ 0.4
HDAC10-204ENST00000429374 CYC1P08574 325 aa17.56■□□□□ 0.4
HDAC10-204ENST00000429374 KRT20P35900 424 aa17.56■□□□□ 0.4
HDAC10-204ENST00000429374 ADH7P40394 386 aa17.56■□□□□ 0.4
HDAC10-204ENST00000429374 IDH2P48735 452 aaKnown RBP17.56■□□□□ 0.4
HDAC10-204ENST00000429374 DAB2P98082 770 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms