RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 RNF32Q9H0A6 362 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 C4orf51C9J302 202 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 DNAJB6O75190 326 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 OR5F1O95221 314 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 ADRB3P13945 408 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 ERP29P30040 261 aaKnown RBP11.68□□□□□ -0.54
CDH3-202ENST00000429102 PPP3R1P63098 170 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 DSG2Q14126 1118 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 ARHGAP15Q53QZ3 475 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 GDPGP1Q6ZNW5 385 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 UBE3DQ7Z6J8 389 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 DCUN1D3Q8IWE4 304 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 OR10G6Q8NH81 332 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 OR7D2Q96RA2 312 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 NANSQ9NR45 359 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 MBNL1Q9NR56 388 aaKnown RBP11.68□□□□□ -0.54
CDH3-202ENST00000429102 KLHL28Q9NXS3 571 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 FLVCR2Q9UPI3 526 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 AK6Q9Y3D8 172 aaKnown RBP11.68□□□□□ -0.54
CDH3-202ENST00000429102 DSPPQ9NZW4 1301 aa11.68□□□□□ -0.54
CDH3-202ENST00000429102 DPM1O60762 260 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 PIPP12273 146 aaPredicted RBP11.67□□□□□ -0.54
CDH3-202ENST00000429102 EVX1P49640 407 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 RRAS2P62070 204 aaPredicted RBP11.67□□□□□ -0.54
CDH3-202ENST00000429102 OC90Q02509 493 aaPredicted RBP11.67□□□□□ -0.54
CDH3-202ENST00000429102 CXXC5Q7LFL8 322 aaKnown RBP11.67□□□□□ -0.54
CDH3-202ENST00000429102 ACOT4Q8N9L9 421 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 CACYBPQ9HB71 228 aaKnown RBP11.67□□□□□ -0.54
CDH3-202ENST00000429102 A4GALTQ9NPC4 353 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 ACOXLQ9NUZ1 547 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 ZSCAN32Q9NX65 697 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 SPHK1Q9NYA1 384 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 TESQ9UGI8 421 aaKnown RBP11.67□□□□□ -0.54
CDH3-202ENST00000429102 SATB2Q9UPW6 733 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 POM121CA8CG34 1229 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 OR12D2P58182 307 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 FUT5Q11128 374 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 ADAM15Q13444 863 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 DEFB134Q4QY38 66 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 TP53I3Q53FA7 332 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 CDC73Q6P1J9 531 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 MZT2AQ6P582 158 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 QSOX2Q6ZRP7 698 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 CCDC28AQ8IWP9 274 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 OR4D9Q8NGE8 314 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 APOBEC4Q8WW27 367 aaKnown RBP11.67□□□□□ -0.54
CDH3-202ENST00000429102 AKAP1Q92667 903 aaKnown RBP eCLIP11.67□□□□□ -0.54
CDH3-202ENST00000429102 SIPA1Q96FS4 1042 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 MS4A3Q96HJ5 214 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 ALG8Q9BVK2 526 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 SLC6A17Q9H1V8 727 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 SLA2Q9H6Q3 261 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 BRD7Q9NPI1 651 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 FBXO34Q9NWN3 711 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 DPP7Q9UHL4 492 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 LRRC72A6NJI9 287 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 AIFM1O95831 613 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 CLTBP09497 229 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 BMP7P18075 431 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 ITGB7P26010 798 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 GABRA5P31644 462 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 PSMB10P40306 273 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 RPS5P46782 204 aaKnown RBP11.67□□□□□ -0.54
CDH3-202ENST00000429102 PXNP49023 591 aaPredicted RBP11.67□□□□□ -0.54
CDH3-202ENST00000429102 SUZ12Q15022 739 aaKnown RBP11.67□□□□□ -0.54
CDH3-202ENST00000429102 OCLNQ16625 522 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 ZNF628Q5EBL2 1059 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 LYPD4Q6UWN0 246 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 MTSS1LQ765P7 747 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 FBXL6Q8N531 539 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 CLDN22Q8N7P3 220 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 MORN4Q8NDC4 146 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 LMLNQ96KR4 655 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 INSM2Q96T92 566 aaPredicted RBP11.67□□□□□ -0.54
CDH3-202ENST00000429102 ARHGAP9Q9BRR9 750 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 TEX12Q9BXU0 123 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 C20orf141Q9NUB4 165 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 HEATR5BQ9P2D3 2071 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 CFAP54Q96N23 3096 aa11.67□□□□□ -0.54
CDH3-202ENST00000429102 A0A1W2PRQ8 180 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 LRRN3E7EW58 273 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 ZNF250P15622 560 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 CEBPBP17676 345 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 ITGB8P26012 769 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 BCL6P41182 706 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 KHKP50053 298 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 SEC13P55735 322 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 RAB40BQ12829 278 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 TMEM31Q5JXX7 168 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 LUZP2Q86TE4 346 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 CRIPAKQ8N1N5 446 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 PIAS4Q8N2W9 510 aaPredicted RBP11.66□□□□□ -0.54
CDH3-202ENST00000429102 OR8D1Q8WZ84 308 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 SUSD6Q92537 303 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 MSLNLQ96KJ4 702 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 PRRC1Q96M27 445 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 ABHD1Q96SE0 405 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 LRRN3Q9H3W5 708 aa11.66□□□□□ -0.54
CDH3-202ENST00000429102 MRPS30Q9NP92 439 aaKnown RBP11.66□□□□□ -0.54
CDH3-202ENST00000429102 SAGE1Q9NXZ1 904 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms