RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 TBX1O43435 398 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 FMO6PO60774 539 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 SNX4O95219 450 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 HMGN1P05114 100 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 IGHV4-34P06331 123 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 CTSEP14091 401 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 NID1P14543 1247 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 LTBRP36941 435 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 ETV5P41161 510 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 LSSP48449 732 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 ETV1P50549 477 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 CDH11P55287 796 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 RAB38P57729 211 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 HOXC5Q00444 222 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 ID2Q02363 134 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 RUNX1T1Q06455 604 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 CDC20Q12834 499 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 CCINQ13939 588 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 DOC2BQ14184 412 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 PGGHGQ32M88 737 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 CLEC12AQ5QGZ9 265 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 AGAP7PQ5VUJ5 663 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 LAPTM4BQ86VI4 370 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 SLC22A16Q86VW1 577 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 CACTIN-AS1Q8N1I8 211 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 CA13Q8N1Q1 262 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 OR2T33Q8NG76 320 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 TMEM255BQ8WV15 326 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 PATE1Q8WXA2 126 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 ITPKCQ96DU7 683 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 SMURF1Q9HCE7 757 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 C14orf105Q9NVL8 296 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 CLCA2Q9UQC9 943 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 F5P12259 2224 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 SPTY2D1-AS1A0A0U1RR47 76 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 OR5K3A6NET4 321 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 BOLA2-SMG1P6H3BVE0 249 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 DLL1O00548 723 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 SURF4O15260 269 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 LDB3O75112 727 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 PTTG1O95997 202 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 GPR4P46093 362 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 BLKP51451 505 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 ZNF136P52737 540 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 GAS1P54826 345 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 DEFA1P59665 94 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 DEFA3P59666 94 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 SKP1P63208 163 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 POU6F2P78424 691 aaPredicted RBP12.74□□□□□ -0.37
THBS3-202ENST00000428962 BNC1Q01954 994 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 TFF2Q03403 129 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 MAP4K2Q12851 820 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 DNASE1L3Q13609 305 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 PRICKLE4Q2TBC4 344 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 CCNJQ5T5M9 372 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 LIPKQ5VXJ0 399 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 PAQR6Q6TCH4 344 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 PRSS41Q7RTY9 318 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 CCDC190Q86UF4 302 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 MEX3DQ86XN8 651 aaKnown RBP12.74□□□□□ -0.37
THBS3-202ENST00000428962 RNF113BQ8IZP6 322 aaKnown RBP12.74□□□□□ -0.37
THBS3-202ENST00000428962 SLC44A3Q8N4M1 653 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 GPR151Q8TDV0 419 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 UFD1Q92890 307 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 NELL2Q99435 816 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 SLC30A2Q9BRI3 323 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 CCDC32Q9BV29 185 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 SEMA6CQ9H3T2 930 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 MAT2BQ9NZL9 334 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 GPR52Q9Y2T5 361 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 SPIN1Q9Y657 262 aaPredicted RBP12.74□□□□□ -0.37
THBS3-202ENST00000428962 SCN3AQ9NY46 2000 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 EYSQ5T1H1 3165 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 DNAJB6O75190 326 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 THEGLP0DJG4 465 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 VSX2P58304 361 aaPredicted RBP12.74□□□□□ -0.37
THBS3-202ENST00000428962 HHEXQ03014 270 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 EIF2B5Q13144 721 aaKnown RBP12.74□□□□□ -0.37
THBS3-202ENST00000428962 RPL13AP3Q6NVV1 102 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 SLC30A6Q6NXT4 461 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 C11orf74Q86VG3 221 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 GALNT12Q8IXK2 581 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 POGLUT1Q8NBL1 392 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 GALNT6Q8NCL4 622 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 OR52L1Q8NGH7 329 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 OR4Q3Q8NH05 313 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 FAM174AQ8TBP5 190 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 KCNS3Q9BQ31 491 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 NEURL2Q9BR09 285 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 TCEAL2Q9H3H9 227 aaPredicted RBP12.74□□□□□ -0.37
THBS3-202ENST00000428962 TMEM74BQ9NUR3 256 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 POMT2Q9UKY4 750 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 TMEM5Q9Y2B1 443 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 NTNG1Q9Y2I2 539 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 PCDHGB6Q9Y5F9 930 aa12.74□□□□□ -0.37
THBS3-202ENST00000428962 MN1Q10571 1320 aaPredicted RBP12.73□□□□□ -0.37
THBS3-202ENST00000428962 C5orf42Q9H799 3197 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 CDHR4A6H8M9 788 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 UNC119BA6NIH7 251 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 SLC30A4O14863 429 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms