RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 SFXN5Q8TD22 340 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 HHIPL1Q96JK4 782 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 FAM71F1Q96KD3 344 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-208ENST00000428599 ZNF578Q96N58 590 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-208ENST00000428599 PKP2Q99959 881 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 CCDC32Q9BV29 185 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 MMP27Q9H306 513 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 TMEM9Q9P0T7 183 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 PISDQ9UG56 409 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 PTBP2Q9UKA9 531 aaKnown RBP8.45□□□□□ -1.06
CTNND1-208ENST00000428599 K7ERQ8 282 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 ADAP00813 363 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 MTHFD2P13995 350 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 ZNF182P17025 639 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-208ENST00000428599 CD79BP40259 229 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 CAV2P51636 162 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 CLDN10P78369 228 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 ATP6AP1Q15904 470 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 C6orf183Q5T699 404 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 SLC35F2Q8IXU6 374 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 TCEAL8Q8IYN2 117 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 KLHL42Q9P2K6 505 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 GJD2Q9UKL4 321 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 MYO9BQ13459 2157 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 H3BQ06 376 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-208ENST00000428599 YY2O15391 372 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 NUDT21O43809 227 aaKnown RBP8.45□□□□□ -1.06
CTNND1-208ENST00000428599 OR2T1O43869 369 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 KCNK5O95279 499 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 CBX7O95931 251 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 HPRP00739 348 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 RPS2P15880 293 aaKnown RBP8.45□□□□□ -1.06
CTNND1-208ENST00000428599 PBX2P40425 430 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 CHRNEQ04844 493 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 MPP7Q5T2T1 576 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 PLCXD3Q63HM9 321 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 KANK2Q63ZY3 851 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 KIF18BQ86Y91 864 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 TANKQ92844 425 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 TOMM40LQ969M1 308 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 MRGPRX2Q96LB1 330 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 MICU1Q9BPX6 476 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 APOOQ9BUR5 198 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 APMAPQ9HDC9 416 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 HCFC1R1Q9NWW0 138 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 ERVK13-1Q9NX77 482 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 PLEK2Q9NYT0 353 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 ACTR10Q9NZ32 417 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 ZNF223Q9UK11 482 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-208ENST00000428599 SERPINA7P05543 415 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 TAS2R31P59538 309 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 TCEAL1Q15170 157 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 DCAF12Q5T6F0 453 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 NANOGP8Q6NSW7 305 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 RPS27LQ71UM5 84 aaKnown RBP8.45□□□□□ -1.06
CTNND1-208ENST00000428599 BPHLQ86WA6 291 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-208ENST00000428599 GRAMD2AQ8IUY3 354 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 Q8N402 240 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 OR51Q1Q8NH59 317 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 NPRL2Q8WTW4 380 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 SDSLQ96GA7 329 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 FAM46AQ96IP4 442 aaKnown RBP8.45□□□□□ -1.06
CTNND1-208ENST00000428599 NANOGQ9H9S0 305 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 GDE1Q9NZC3 331 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 SLC7A7Q9UM01 511 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 VDAC3Q9Y277 283 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 KIR2DS5A0A0G2JLQ3 304 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 A0A0G2JNG1 304 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 FAM230AA0A1W2PPH8 454 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 BTBD17A6NE02 478 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 KIR2DS3K7RE56 304 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 PIP5K1CO60331 668 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 JRKO75564 520 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 NDUFB2O95178 105 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 FOXN2P32314 431 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 CD70P32970 193 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 P2RY2P41231 377 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 ALDH3B1P43353 468 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 RAB5BP61020 215 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 GALNT1Q10472 559 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-208ENST00000428599 FAPQ12884 760 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 KIR2DS5Q14953 304 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 OR7A5Q15622 319 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 NKPD1Q17RQ9 610 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 RAB41Q5JT25 222 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 PPP1R3BQ86XI6 285 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 CDRT4Q8N9R6 151 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 STK35Q8TDR2 534 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 FBXL8Q96CD0 374 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 FBXL20Q96IG2 436 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 SIGLEC10Q96LC7 697 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 TOX2Q96NM4 488 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 FAIMQ9NVQ4 179 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 STUB1Q9UNE7 303 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 B3GNT3Q9Y2A9 372 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 TAF1P21675 1872 aa8.45□□□□□ -1.06
CTNND1-208ENST00000428599 TIAM2Q8IVF5 1701 aa8.44□□□□□ -1.06
CTNND1-208ENST00000428599 ANKRD36CQ5JPF3 1778 aa8.44□□□□□ -1.06
CTNND1-208ENST00000428599 A0A1W2PPH5 198 aa8.44□□□□□ -1.06
CTNND1-208ENST00000428599 HMX3A6NHT5 357 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms