RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 GRAMD1BQ3KR37 738 aa14.84□□□□□ -0.03
VARS-216ENST00000428445 CYP27C1Q4G0S4 372 aa14.84□□□□□ -0.03
VARS-216ENST00000428445 FAM71E1Q6IPT2 247 aa14.84□□□□□ -0.03
VARS-216ENST00000428445 PLEKHM3Q6ZWE6 761 aa14.84□□□□□ -0.03
VARS-216ENST00000428445 FAM214BQ7L5A3 538 aa14.84□□□□□ -0.03
VARS-216ENST00000428445 GATSQ8NAP1 163 aa14.84□□□□□ -0.03
VARS-216ENST00000428445 NOA1Q8NC60 698 aaKnown RBP14.84□□□□□ -0.03
VARS-216ENST00000428445 MAPK1IP1LQ8NDC0 245 aa14.84□□□□□ -0.03
VARS-216ENST00000428445 ELP4Q96EB1 424 aa14.84□□□□□ -0.03
VARS-216ENST00000428445 PTGES2Q9H7Z7 377 aa14.84□□□□□ -0.03
VARS-216ENST00000428445 SDHAF3Q9NRP4 125 aa14.84□□□□□ -0.03
VARS-216ENST00000428445 FBN1P35555 2871 aaKnown RBP14.84□□□□□ -0.03
VARS-216ENST00000428445 HIVEP2P31629 2446 aa14.84□□□□□ -0.03
VARS-216ENST00000428445 A0A087WV62 115 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 H3BQF6 201 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 COQ9O75208 318 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 URI1O94763 535 aaPredicted RBP14.83□□□□□ -0.04
VARS-216ENST00000428445 ANGPTL1O95841 491 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 ATP5F1P24539 256 aaPredicted RBP14.83□□□□□ -0.04
VARS-216ENST00000428445 PKNOX1P55347 436 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.83□□□□□ -0.04
VARS-216ENST00000428445 TMEM44Q2T9K0 475 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 CTU2Q2VPK5 515 aaKnown RBP14.83□□□□□ -0.04
VARS-216ENST00000428445 ANKRD26P1Q6NSI1 321 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 STAC2Q6ZMT1 411 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 C20orf204Q6ZNR8 217 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 ZNF551Q7Z340 670 aaPredicted RBP14.83□□□□□ -0.04
VARS-216ENST00000428445 METTL25Q8N6Q8 603 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 CEP112Q8N8E3 955 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.83□□□□□ -0.04
VARS-216ENST00000428445 IGFBPL1Q8WX77 278 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 GFM2Q969S9 779 aaKnown RBP14.83□□□□□ -0.04
VARS-216ENST00000428445 EGLN2Q96KS0 407 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 AMDHD1Q96NU7 426 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 PRRG4Q9BZD6 226 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 GSX2Q9BZM3 304 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 GSTO2Q9H4Y5 243 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 MID1IP1Q9NPA3 183 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 EQTNQ9NQ60 294 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 PLSCR4Q9NRQ2 329 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 DDX18Q9NVP1 670 aaKnown RBP14.83□□□□□ -0.04
VARS-216ENST00000428445 FAM120CQ9NX05 1096 aaKnown RBP14.83□□□□□ -0.04
VARS-216ENST00000428445 TAS2R7Q9NYW3 318 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 ZNF175Q9Y473 711 aa14.83□□□□□ -0.04
VARS-216ENST00000428445 PSMG1O95456 288 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 ENO1P06733 434 aaKnown RBP14.82□□□□□ -0.04
VARS-216ENST00000428445 GSTA1P08263 222 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 ABHD2P08910 425 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 PRKAA2P54646 552 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 RPS3AP61247 264 aaKnown RBP14.82□□□□□ -0.04
VARS-216ENST00000428445 OCRLQ01968 901 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 ZNF763Q0D2J5 394 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 CAPRIN1Q14444 709 aaKnown RBP14.82□□□□□ -0.04
VARS-216ENST00000428445 GANABQ14697 944 aaKnown RBP14.82□□□□□ -0.04
VARS-216ENST00000428445 ZNF704Q6ZNC4 412 aaPredicted RBP14.82□□□□□ -0.04
VARS-216ENST00000428445 ZAR1Q86SH2 424 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 WFDC8Q8IUA0 241 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 OR2L13Q8N349 312 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 CCNYL1Q8N7R7 359 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 FBXO30Q8TB52 745 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 ACMSDQ8TDX5 336 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 PLPPR2Q96GM1 343 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 TBL1XR1Q9BZK7 514 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 TMEM185BQ9H7F4 350 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 Q9N2J8 555 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 TNFRSF12AQ9NP84 129 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 MIEF1Q9NQG6 463 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 GRID1Q9ULK0 1009 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 ABCG2Q9UNQ0 655 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 AP4B1Q9Y6B7 739 aa14.82□□□□□ -0.04
VARS-216ENST00000428445 EXOC1LA0A1B0GW35 172 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 TNFSF11O14788 317 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 CXCL13O43927 109 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 CLK3P49761 638 aaKnown RBP14.81□□□□□ -0.04
VARS-216ENST00000428445 PRKAG1P54619 331 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 PPP2R2BQ00005 443 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 C17orf67Q0P5P2 114 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 LCP2Q13094 533 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 TSC22D1Q15714 1073 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 MFSD12Q6NUT3 480 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 SH2D5Q6ZV89 423 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 TRMT10CQ7L0Y3 403 aaKnown RBP14.81□□□□□ -0.04
VARS-216ENST00000428445 OR4C3Q8NH37 302 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 OR10D3Q8NH80 312 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 FAM76AQ8TAV0 307 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 RAB3IL1Q8TBN0 382 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 CIDECQ96AQ7 238 aaPredicted RBP14.81□□□□□ -0.04
VARS-216ENST00000428445 CCDC126Q96EE4 140 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 L3HYPDHQ96EM0 354 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 OTUB1Q96FW1 271 aaPredicted RBP14.81□□□□□ -0.04
VARS-216ENST00000428445 LMF2Q9BU23 707 aaKnown RBP14.81□□□□□ -0.04
VARS-216ENST00000428445 C12orf49Q9H741 205 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 HHATLQ9HCP6 504 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 FBXO34Q9NWN3 711 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 PTGDR2Q9Y5Y4 395 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 FREM1Q5H8C1 2179 aa14.81□□□□□ -0.04
VARS-216ENST00000428445 UQCRHLA0A096LP55 91 aa14.8□□□□□ -0.04
VARS-216ENST00000428445 TTC36A6NLP5 189 aa14.8□□□□□ -0.04
VARS-216ENST00000428445 PLGP00747 810 aaPredicted RBP14.8□□□□□ -0.04
VARS-216ENST00000428445 IFI6P09912 130 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms