RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 SRD5A2P31213 254 aa16.4■□□□□ 0.22
HERC3-205ENST00000426683 CHI3L1P36222 383 aaPredicted RBP16.4■□□□□ 0.22
HERC3-205ENST00000426683 CDKN2CP42773 168 aa16.4■□□□□ 0.22
HERC3-205ENST00000426683 ZFP36L2P47974 494 aaKnown RBP16.4■□□□□ 0.22
HERC3-205ENST00000426683 POLR2JP52435 117 aaKnown RBP16.4■□□□□ 0.22
HERC3-205ENST00000426683 CASP9P55211 416 aa16.4■□□□□ 0.22
HERC3-205ENST00000426683 CRYZQ08257 329 aaKnown RBP16.4■□□□□ 0.22
HERC3-205ENST00000426683 SAXO2Q658L1 398 aa16.4■□□□□ 0.22
HERC3-205ENST00000426683 RPTNQ6XPR3 784 aa16.4■□□□□ 0.22
HERC3-205ENST00000426683 MRGPRGQ86SM5 289 aa16.4■□□□□ 0.22
HERC3-205ENST00000426683 FADS6Q8N9I5 356 aa16.4■□□□□ 0.22
HERC3-205ENST00000426683 OR2M3Q8NG83 312 aa16.4■□□□□ 0.22
HERC3-205ENST00000426683 DUSP19Q8WTR2 217 aa16.4■□□□□ 0.22
HERC3-205ENST00000426683 PHF10Q8WUB8 498 aaKnown RBP16.4■□□□□ 0.22
HERC3-205ENST00000426683 ITLN2Q8WWU7 325 aaPredicted RBP16.4■□□□□ 0.22
HERC3-205ENST00000426683 OR51I1Q9H343 314 aa16.4■□□□□ 0.22
HERC3-205ENST00000426683 UBQLN4Q9NRR5 601 aa16.4■□□□□ 0.22
HERC3-205ENST00000426683 ALKBH4Q9NXW9 302 aa16.4■□□□□ 0.22
HERC3-205ENST00000426683 TAS2R10Q9NYW0 307 aa16.4■□□□□ 0.22
HERC3-205ENST00000426683 MED11Q9P086 117 aa16.4■□□□□ 0.22
HERC3-205ENST00000426683 USP9XQ93008 2570 aaPredicted RBP16.39■□□□□ 0.22
HERC3-205ENST00000426683 FAM234BA2RU67 622 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 ALG1L2C9J202 215 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 ATP8B1O43520 1251 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 CLDN1O95832 211 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 GSNP06396 782 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 HPGDP15428 266 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 BMP7P18075 431 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 ACVR2AP27037 513 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 DPP4P27487 766 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 GCKP35557 465 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 MRPL19P49406 292 aaKnown RBP16.39■□□□□ 0.21
HERC3-205ENST00000426683 SMSP52788 366 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 C17orf67Q0P5P2 114 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 ZNF621Q6ZSS3 439 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 RPRMLQ8N4K4 120 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 MARVELD2Q8N4S9 558 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 TRIML2Q8N7C3 387 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 GATSQ8NAP1 163 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 RFWD2Q8NHY2 731 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 NEURL3Q96EH8 262 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 TIMP4Q99727 224 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 UGT2B28Q9BY64 529 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 NPHS2Q9NP85 383 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 PLEKHB1Q9UF11 243 aaPredicted RBP16.39■□□□□ 0.21
HERC3-205ENST00000426683 DCTN4Q9UJW0 460 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 NCKAP5O14513 1909 aa16.39■□□□□ 0.21
HERC3-205ENST00000426683 NPIPA5A0A0B4J1W7 369 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 NPIPA7E9PJI5 369 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 SCDO00767 359 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 RFXANKO14593 260 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 NDUFB5O43674 189 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 WDR1O75083 606 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 C1QCP02747 245 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 NPIPA8P0DM63 369 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 OR12D1P0DN82 309 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 TCEA1P23193 301 aaKnown RBP16.38■□□□□ 0.21
HERC3-205ENST00000426683 DSCR4P56555 118 aaPredicted RBP16.38■□□□□ 0.21
HERC3-205ENST00000426683 TIGD2Q4W5G0 525 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 NHSL2Q5HYW2 709 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 VASNQ6EMK4 673 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 TMEM211Q6ICI0 200 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 TNFAIP8L2Q6P589 184 aaPredicted RBP16.38■□□□□ 0.21
HERC3-205ENST00000426683 DNAJC14Q6Y2X3 702 aaPredicted RBP16.38■□□□□ 0.21
HERC3-205ENST00000426683 MSANTD1Q6ZTZ1 278 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 IFNEQ86WN2 208 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 ZNF808Q8N4W9 903 aaPredicted RBP16.38■□□□□ 0.21
HERC3-205ENST00000426683 CHDHQ8NE62 594 aaPredicted RBP16.38■□□□□ 0.21
HERC3-205ENST00000426683 MIPOL1Q8TD10 442 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 ABTB1Q969K4 478 aaPredicted RBP16.38■□□□□ 0.21
HERC3-205ENST00000426683 SDF2Q99470 211 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 PTGES2Q9H7Z7 377 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 RMND5AQ9H871 391 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 EXD2Q9NVH0 621 aa16.38■□□□□ 0.21
HERC3-205ENST00000426683 RPH3AQ9Y2J0 694 aaPredicted RBP16.38■□□□□ 0.21
HERC3-205ENST00000426683 ZNF407Q9C0G0 2248 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 IGLV3-32A0A0A0MS00 114 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 GMFGO60234 142 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 AGR2O95994 175 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 ACTL6AO96019 429 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 AK1P00568 194 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 GABRA1P14867 456 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 DCTP40126 519 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 KHKP50053 298 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 FLYWCH1Q4VC44 716 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 DCST1Q5T197 706 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 C1orf185Q5T7R7 199 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 RTL6Q6ICC9 239 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 MAMDC2Q7Z304 686 aaPredicted RBP16.37■□□□□ 0.21
HERC3-205ENST00000426683 ULK2Q8IYT8 1036 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 XAGE5Q8WWM1 108 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 STON2Q8WXE9 905 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 RAB8BQ92930 207 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 VPS33AQ96AX1 596 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 ITCHQ96J02 903 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 SFXN2Q96NB2 322 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 HOXD1Q9GZZ0 328 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 MRPS18CQ9Y3D5 142 aaKnown RBP16.37■□□□□ 0.21
HERC3-205ENST00000426683 FAM215AQ9Y5M1 114 aa16.37■□□□□ 0.21
HERC3-205ENST00000426683 LRRK2Q5S007 2527 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms