RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 ERP44Q9BS26 406 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 Q9N2J8 555 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 SLC35C2Q9NQQ7 365 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 FAIMQ9NVQ4 179 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 TMCO1Q9UM00 188 aa13.08□□□□□ -0.32
PDAP1-202ENST00000426447 ANK3Q12955 4377 aaKnown RBP13.08□□□□□ -0.32
PDAP1-202ENST00000426447 NBEAL1Q6ZS30 2694 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 FAM234BA2RU67 622 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 STX16-NPEPL1H3BU86 382 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 STX16O14662 325 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 DLX3O60479 287 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 ANGPTL1O95841 491 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 OTCP00480 354 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 RBP1P09455 135 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 CTAGE8P0CG41 777 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 ADH6P28332 368 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 MAGEA4P43358 317 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 NUDT6P53370 316 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 ZNHIT3Q15649 155 aaPredicted RBP13.07□□□□□ -0.32
PDAP1-202ENST00000426447 PGGHGQ32M88 737 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 TECRLQ5HYJ1 363 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 TMEM201Q5SNT2 666 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 PDSS1Q5T2R2 415 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 FIGNL1Q6PIW4 674 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 DNM1P46Q6ZS02 220 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 GALNT10Q86SR1 603 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 EXOC3L1Q86VI1 746 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 CTAGE4Q8IX94 777 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 KBTBD8Q8NFY9 601 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 C11orf24Q96F05 449 aaPredicted RBP13.07□□□□□ -0.32
PDAP1-202ENST00000426447 REXO5Q96IC2 774 aaKnown RBP13.07□□□□□ -0.32
PDAP1-202ENST00000426447 SHARPINQ9H0F6 387 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 LRTM1Q9HBL6 345 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 CISD1Q9NZ45 108 aaKnown RBP13.07□□□□□ -0.32
PDAP1-202ENST00000426447 MCM8Q9UJA3 840 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 NFU1Q9UMS0 254 aa13.07□□□□□ -0.32
PDAP1-202ENST00000426447 IGHV4-30-2A0A087WSY4 118 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 TNFSF11O14788 317 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 PCDH7O60245 1069 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 IL33O95760 270 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 PABPC4LP0CB38 370 aaKnown RBP13.06□□□□□ -0.32
PDAP1-202ENST00000426447 TSPAN8P19075 237 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 ME2P23368 584 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 AGTR1P30556 359 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 CDH13P55290 713 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 BSPH1Q075Z2 132 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 TAB1Q15750 504 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 NRF1Q16656 503 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 TMEM44Q2T9K0 475 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 TMEM249Q2WGJ8 235 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 SFRP5Q5T4F7 317 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 HBMQ6B0K9 141 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 DNAJC14Q6Y2X3 702 aaPredicted RBP13.06□□□□□ -0.32
PDAP1-202ENST00000426447 RPS27LQ71UM5 84 aaKnown RBP13.06□□□□□ -0.32
PDAP1-202ENST00000426447 OR2V1Q8NHB1 315 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 SLC9A6Q92581 669 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 OSTF1Q92882 214 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 ADAD1Q96M93 576 aaKnown RBP13.06□□□□□ -0.32
PDAP1-202ENST00000426447 TNFRSF13CQ96RJ3 184 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 TRAF4Q9BUZ4 470 aaPredicted RBP13.06□□□□□ -0.32
PDAP1-202ENST00000426447 C19orf24Q9BVV8 132 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 LPAR3Q9UBY5 353 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 DMGDHQ9UI17 866 aaKnown RBP13.06□□□□□ -0.32
PDAP1-202ENST00000426447 SAR1BQ9Y6B6 198 aa13.06□□□□□ -0.32
PDAP1-202ENST00000426447 ABCA1O95477 2261 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 FAM187AA6NFU0 413 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 PPP6CO00743 305 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 ADAMDEC1O15204 470 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 UTS2O95399 124 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 NTN1O95631 604 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 CD8AP01732 235 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 JUNP05412 331 aaKnown RBP13.05□□□□□ -0.32
PDAP1-202ENST00000426447 ZNF17P17021 662 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 PTNP21246 168 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 SERPINB8P50452 374 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 NCBP2P52298 156 aaKnown RBP eCLIP13.05□□□□□ -0.321e-7■□□□□ 10.3
PDAP1-202ENST00000426447 PLTPP55058 493 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 CARD18P57730 90 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 RAC1P63000 192 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 CSTF3Q12996 717 aaKnown RBP13.05□□□□□ -0.32
PDAP1-202ENST00000426447 LETMD1Q6P1Q0 360 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 CLEC2AQ6UVW9 174 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 ESPNLQ6ZVH7 1005 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 PLD6Q8N2A8 252 aaKnown RBP13.05□□□□□ -0.32
PDAP1-202ENST00000426447 PIWIL2Q8TC59 973 aaKnown RBP13.05□□□□□ -0.32
PDAP1-202ENST00000426447 C16orf78Q8WTQ4 265 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 ROBO4Q8WZ75 1007 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 KISS1RQ969F8 398 aaPredicted RBP13.05□□□□□ -0.32
PDAP1-202ENST00000426447 ADGRG7Q96K78 797 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 USB1Q9BQ65 265 aaKnown RBP13.05□□□□□ -0.32
PDAP1-202ENST00000426447 TRIM2Q9C040 744 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 TMEM185BQ9H7F4 350 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 C3orf14Q9HBI5 128 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 B3GALT5Q9Y2C3 310 aa13.05□□□□□ -0.32
PDAP1-202ENST00000426447 A0A087WV62 115 aa13.04□□□□□ -0.32
PDAP1-202ENST00000426447 A0A087WZY1 265 aa13.04□□□□□ -0.32
PDAP1-202ENST00000426447 A0A0J9YW62 118 aa13.04□□□□□ -0.32
PDAP1-202ENST00000426447 HMX2A2RU54 273 aa13.04□□□□□ -0.32
PDAP1-202ENST00000426447 DPRXA6NFQ7 191 aa13.04□□□□□ -0.32
PDAP1-202ENST00000426447 UBFD1O14562 309 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms