RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 THSD1Q9NS62 852 aa12.52□□□□□ -0.4
USP42-203ENST00000426246 ANKRD34BA5PLL1 514 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 C1QTNF3-AMACRE9PGA6 284 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 NOS1APO75052 506 aaPredicted RBP12.52□□□□□ -0.41
USP42-203ENST00000426246 SCO1O75880 301 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 AIFM1O95831 613 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 CHRNB1P11230 501 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 PTHLHP12272 177 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 TRHRP34981 398 aaPredicted RBP12.52□□□□□ -0.41
USP42-203ENST00000426246 PSMB10P40306 273 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 PDX1P52945 283 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 C1orf61Q13536 156 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 ERV3-1Q14264 604 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 COL19A1Q14993 1142 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 AGERQ15109 404 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 PRSS45Q7RTY3 260 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 OR8D4Q8NGM9 314 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 MAGEB10Q96LZ2 347 aaPredicted RBP12.52□□□□□ -0.41
USP42-203ENST00000426246 CTRCQ99895 268 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 MS4A8Q9BY19 250 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 CFAP54Q96N23 3096 aa12.52□□□□□ -0.41
USP42-203ENST00000426246 HOXB9P17482 250 aaPredicted RBP12.51□□□□□ -0.41
USP42-203ENST00000426246 ITGB7P26010 798 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 BCL6P41182 706 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 RFX2P48378 723 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 PSPHP78330 225 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 CDK3Q00526 305 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 ENTPD8Q5MY95 495 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 DEFB119Q8N690 84 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 OR6F1Q8NGZ6 308 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 MSLNLQ96KJ4 702 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 COQ10AQ96MF6 247 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 PTCHD1Q96NR3 888 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 RNF121Q9H920 327 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 ENAMQ9NRM1 1142 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 NUDT15Q9NV35 164 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 THAP10Q9P2Z0 257 aaPredicted RBP12.51□□□□□ -0.41
USP42-203ENST00000426246 KLK4Q9Y5K2 254 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 CENPVL1A0A0U1RR11 272 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 EDDM13A0A1B0GTR0 161 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 A0A1W2PQ72 361 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 INMT-MINDY4F8WBC2 141 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 DOK2O60496 412 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 MPIP34949 423 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 SOX2P48431 317 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 SMIM11AP58511 58 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 PRR5P85299 388 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 ELAVL3Q14576 367 aaKnown RBP12.51□□□□□ -0.41
USP42-203ENST00000426246 TP53I3Q53FA7 332 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 COL13A1Q5TAT6 717 aaPredicted RBP12.51□□□□□ -0.41
USP42-203ENST00000426246 AMIGO1Q86WK6 493 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 OR5T3Q8NGG3 340 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 CXorf40BQ96DE9 158 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 ZMYND19Q96E35 227 aaPredicted RBP12.51□□□□□ -0.41
USP42-203ENST00000426246 FN3KQ9H479 309 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 C3orf14Q9HBI5 128 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 FBXO34Q9NWN3 711 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 KCMF1Q9P0J7 381 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 ALG5Q9Y673 324 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 CELSR3Q9NYQ7 3312 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 APEHP13798 732 aaKnown RBP12.51□□□□□ -0.41
USP42-203ENST00000426246 BSGP35613 385 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 E2F2Q14209 437 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 CDKL4Q5MAI5 379 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 FAM205BPQ63HN1 556 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 CEACAM19Q7Z692 300 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 CCDC190Q86UF4 302 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 TDHQ8IZJ6 230 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 OR52L1Q8NGH7 329 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 OR52E1Q8NGJ3 308 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 CHAC2Q8WUX2 184 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 OR7D2Q96RA2 312 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 KLHL42Q9P2K6 505 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 A4GNTQ9UNA3 340 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 UNC13CQ8NB66 2214 aa12.51□□□□□ -0.41
USP42-203ENST00000426246 IQCMA0A1B0GVH7 501 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 TRIM64BA6NI03 449 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 ZNF670-ZNF695F2Z2N8 137 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 SNRNP200O75643 2136 aaKnown RBP12.5□□□□□ -0.41
USP42-203ENST00000426246 RPN2P04844 631 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 RPS27P42677 84 aaKnown RBP12.5□□□□□ -0.41
USP42-203ENST00000426246 KHKP50053 298 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.5□□□□□ -0.41
USP42-203ENST00000426246 ZNF658BQ4V348 819 aaPredicted RBP12.5□□□□□ -0.41
USP42-203ENST00000426246 PRPF38BQ5VTL8 546 aaKnown RBP12.5□□□□□ -0.41
USP42-203ENST00000426246 MZT2BQ6NZ67 158 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 SLC36A4Q6YBV0 504 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 RASGRP3Q8IV61 690 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 NANOGP1Q8N7R0 232 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 OR2L2Q8NH16 312 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 OR4K13Q8NH42 304 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 PFN4Q8NHR9 129 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 NEURL3Q96EH8 262 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 CHST8Q9H2A9 424 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 PRO3102Q9H379 93 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 A0A1W2PQU0 124 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 A8MUA0 341 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 PEX12O00623 359 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 HCN1O60741 890 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 CPMP14384 443 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms