RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 SDHAF3Q9NRP4 125 aa12.05□□□□□ -0.48
VEGFB-202ENST00000426086 CDC42EP3Q9UKI2 254 aa12.05□□□□□ -0.48
VEGFB-202ENST00000426086 ABCG2Q9UNQ0 655 aa12.05□□□□□ -0.48
VEGFB-202ENST00000426086 ALPK2Q86TB3 2170 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 IGLV3-32A0A0A0MS00 114 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 SHISA9B4DS77 424 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 EIF3HO15372 352 aaKnown RBP eCLIP12.04□□□□□ -0.48
VEGFB-202ENST00000426086 ESRRBO95718 433 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 ANGPTL1O95841 491 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 ADH6P28332 368 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 RFX3P48380 749 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 C21orf58P58505 322 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 TRA2BP62995 288 aaKnown RBP12.04□□□□□ -0.48
VEGFB-202ENST00000426086 IRX1P78414 480 aaPredicted RBP12.04□□□□□ -0.48
VEGFB-202ENST00000426086 SFRP5Q5T4F7 317 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 UBAP2Q5T6F2 1119 aaKnown RBP12.04□□□□□ -0.48
VEGFB-202ENST00000426086 METTL2BQ6P1Q9 378 aaKnown RBP12.04□□□□□ -0.48
VEGFB-202ENST00000426086 TFAP2EQ6VUC0 442 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 IL17RELQ6ZVW7 336 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 DTX2Q86UW9 622 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 CEP112Q8N8E3 955 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 STEAP2Q8NFT2 490 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 PIWIL2Q8TC59 973 aaKnown RBP12.04□□□□□ -0.48
VEGFB-202ENST00000426086 ABHD3Q8WU67 409 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 ERP27Q96DN0 273 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 HS6ST2Q96MM7 605 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 TNFRSF13CQ96RJ3 184 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 KCNK17Q96T54 332 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 RHNO1Q9BSD3 238 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 BEX2Q9BXY8 128 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 FAM120CQ9NX05 1096 aaKnown RBP12.04□□□□□ -0.48
VEGFB-202ENST00000426086 TAS2R9Q9NYW1 312 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 XPR1Q9UBH6 696 aa12.04□□□□□ -0.48
VEGFB-202ENST00000426086 FREM1Q5H8C1 2179 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 GXYLT2A0PJZ3 443 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 ADAMDEC1O15204 470 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 OR4F21O95013 312 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 IL33O95760 270 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 TUBBP07437 444 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 RPS17P08708 135 aaKnown RBP12.03□□□□□ -0.48
VEGFB-202ENST00000426086 GSTA2P09210 222 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 ZNF16P17020 682 aaPredicted RBP12.03□□□□□ -0.48
VEGFB-202ENST00000426086 MRPS22P82650 360 aaKnown RBP12.03□□□□□ -0.48
VEGFB-202ENST00000426086 VLDLRP98155 873 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 TRADDQ15628 312 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 GRAMD1BQ3KR37 738 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 CYP27C1Q4G0S4 372 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 STK32CQ86UX6 486 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 FAM9CQ8IZT9 166 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 POC1BQ8TC44 478 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 ESRP2Q9H6T0 727 aaKnown RBP12.03□□□□□ -0.48
VEGFB-202ENST00000426086 BRF2Q9HAW0 419 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 SLC35C2Q9NQQ7 365 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 CISD1Q9NZ45 108 aaKnown RBP12.03□□□□□ -0.48
VEGFB-202ENST00000426086 MCM8Q9UJA3 840 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 MCTS1Q9ULC4 181 aaKnown RBP12.03□□□□□ -0.48
VEGFB-202ENST00000426086 CADP27708 2225 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 NBEAL1Q6ZS30 2694 aa12.03□□□□□ -0.48
VEGFB-202ENST00000426086 CCDC189A1A4V9 331 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 STX16-NPEPL1H3BU86 382 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 CCDC188H7C350 402 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 UPK1AO00322 258 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 STX16O14662 325 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 UTS2O95399 124 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 PSMG1O95456 288 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 SYNGR4O95473 234 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 ADAP00813 363 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 JUNP05412 331 aaKnown RBP12.02□□□□□ -0.49
VEGFB-202ENST00000426086 IGHV4-31P0DP07 118 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 EDNRAP25101 427 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 HTR6P50406 440 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 CASP9P55211 416 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 ETF1P62495 437 aaKnown RBP12.02□□□□□ -0.49
VEGFB-202ENST00000426086 LOXL1Q08397 574 aaPredicted RBP12.02□□□□□ -0.49
VEGFB-202ENST00000426086 C17orf67Q0P5P2 114 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 CSTF3Q12996 717 aaKnown RBP12.02□□□□□ -0.49
VEGFB-202ENST00000426086 TMEM107Q6UX40 140 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 TUSC5Q8IXB3 177 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 ZNF525Q8N782 197 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 GATSQ8NAP1 163 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 OR2V1Q8NHB1 315 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 ZNF483Q8TF39 744 aaPredicted RBP12.02□□□□□ -0.49
VEGFB-202ENST00000426086 C16orf78Q8WTQ4 265 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 OSTF1Q92882 214 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 APIPQ96GX9 242 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 RNF145Q96MT1 663 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 SRXN1Q9BYN0 137 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 GRIP2Q9C0E4 1043 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 VPS11Q9H270 941 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 MANSC1Q9H8J5 431 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 LRTM1Q9HBL6 345 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 BARX1Q9HBU1 254 aaPredicted RBP12.02□□□□□ -0.49
VEGFB-202ENST00000426086 GLRX2Q9NS18 164 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 TMEM160Q9NX00 188 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 NPAP1Q9NZP6 1156 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 VPS29Q9UBQ0 182 aa12.02□□□□□ -0.49
VEGFB-202ENST00000426086 DMGDHQ9UI17 866 aaKnown RBP12.02□□□□□ -0.49
VEGFB-202ENST00000426086 SLC35F4A4IF30 521 aa12.01□□□□□ -0.49
VEGFB-202ENST00000426086 ELOA3DA6NLF2 546 aaPredicted RBP12.01□□□□□ -0.49
VEGFB-202ENST00000426086 MYO1GB0I1T2 1018 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms