RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 HLA-BQ31612 363 aa5.31□□□□□ -1.56
HMGB1P32-201ENST00000425971 CAPN13Q6MZZ7 669 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P32-201ENST00000425971 CCDC197Q8NCU1 140 aa5.31□□□□□ -1.56
HMGB1P32-201ENST00000425971 CNNM3Q8NE01 707 aa5.31□□□□□ -1.56
HMGB1P32-201ENST00000425971 OR5M9Q8NGP3 310 aa5.31□□□□□ -1.56
HMGB1P32-201ENST00000425971 MRPL53Q96EL3 112 aaKnown RBP5.31□□□□□ -1.56
HMGB1P32-201ENST00000425971 FAM111AQ96PZ2 611 aa5.31□□□□□ -1.56
HMGB1P32-201ENST00000425971 SPAG8Q99932 426 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P32-201ENST00000425971 FGF22Q9HCT0 170 aa5.31□□□□□ -1.56
HMGB1P32-201ENST00000425971 TECRQ9NZ01 308 aaKnown RBP5.31□□□□□ -1.56
HMGB1P32-201ENST00000425971 MRPS28Q9Y2Q9 187 aaKnown RBP5.31□□□□□ -1.56
HMGB1P32-201ENST00000425971 CSNK1G3Q9Y6M4 447 aa5.31□□□□□ -1.56
HMGB1P32-201ENST00000425971 SDK2Q58EX2 2172 aa5.31□□□□□ -1.56
HMGB1P32-201ENST00000425971 COL1A2P08123 1366 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 B4GAT1O43505 415 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 REC8O95072 547 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 TXNDC12O95881 172 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 IGLV1-44P01699 117 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 RPLP0P05388 317 aaKnown RBP5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 ETS1P14921 441 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 GPC3P51654 580 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 CYCSP99999 105 aaKnown RBP5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 ZNF33AQ06730 810 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 TMEM30BQ3MIR4 351 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 HES3Q5TGS1 186 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 NKAIN2Q5VXU1 208 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 CHMP1BQ7LBR1 199 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 ZER1Q7Z7L7 766 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 ADAD2Q8NCV1 583 aaKnown RBP5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 OR9Q2Q8NGE9 314 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 OR4L1Q8NH43 312 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 ZNF274Q96GC6 653 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 DUX3Q96PT4 197 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 ASCL2Q99929 193 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 RBM4Q9BWF3 364 aaKnown RBP5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 WWP1Q9H0M0 922 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 HPS4Q9NQG7 708 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 CACNG5Q9UF02 275 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 FAM153AQ9UHL3 310 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 HOOK1Q9UJC3 728 aaKnown RBP5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 ADAM28Q9UKQ2 775 aa5.3□□□□□ -1.56
HMGB1P32-201ENST00000425971 TDRD15B5MCY1 1934 aaKnown RBP5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 G3V2L1 256 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 K7EQD1 137 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 NR5A2O00482 541 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 NME2P1O60361 137 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 NXPH2O95156 264 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 PRAMEF12O95522 483 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 TPBGLP0DKB5 382 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 EZRP15311 586 aaKnown RBP5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 FHITP49789 147 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 GEMP55040 296 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 MPPE1Q53F39 396 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 CES4AQ5XG92 561 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 OR6B2Q6IFH4 312 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 WDR88Q6ZMY6 472 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 FRRS1Q6ZNA5 592 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 TAF8Q7Z7C8 310 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 WDR49Q8IV35 697 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 OR6M1Q8NGM8 313 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 DNASE2BQ8WZ79 361 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 ESAMQ96AP7 390 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 RAB39BQ96DA2 213 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 SAMD8Q96LT4 415 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 NSMCE2Q96MF7 247 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 API5Q9BZZ5 524 aaKnown RBP5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 LRRCC1Q9C099 1032 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 SIRPDQ9H106 197 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 ABCG4Q9H172 646 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 MED20Q9H944 212 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 FAM212BQ9NTI7 297 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 MED17Q9NVC6 651 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 WIPI2Q9Y4P8 454 aa5.29□□□□□ -1.56
HMGB1P32-201ENST00000425971 NUP210Q8TEM1 1887 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 SF3B1O75533 1304 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 CNTNAP2Q9UHC6 1331 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 A0A0U1RRA0 63 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 ESYT2A0FGR8 921 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 VPS37CA5D8V6 355 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 ARL5CA6NH57 179 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 A8MU76 341 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 B3GALNT1O75752 331 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 MT-ATP6P00846 226 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 TGFAP01135 160 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 ZNF883P0CG24 379 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 SELEP16581 610 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 PTMSP20962 102 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 SLC6A12P48065 614 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 CAMLGP49069 296 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 CCL11P51671 97 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 SSTP61278 116 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 DRP2Q13474 957 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 WSCD2Q2TBF2 565 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 TTC31Q49AM3 519 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 CCDC40Q4G0X9 1142 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 RFTN2Q52LD8 501 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 ZSCAN25Q6NSZ9 544 aa5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 Q71RC1 249 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P32-201ENST00000425971 ZNF519Q8TB69 540 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms