RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 STK25O00506 426 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 SOCS6O14544 535 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 F11P03951 625 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 KLK1P06870 262 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 RHOCP08134 193 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 ACRV1P26436 265 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 ACADLP28330 430 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 FGF9P31371 208 aaPredicted RBP10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 RHOAP61586 193 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 ARF5P84085 180 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 PLBD1Q6P4A8 553 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 RBMS3Q6XE24 437 aaKnown RBP10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 OAFQ86UD1 273 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 HDDC3Q8N4P3 179 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 FBXO15Q8NCQ5 510 aaPredicted RBP10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 GPR26Q8NDV2 337 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 OR52N2Q8NGI0 321 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 OR5M1Q8NGP8 315 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 OR51Q1Q8NH59 317 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 FATE1Q969F0 183 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 CRB3Q9BUF7 120 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 SMG9Q9H0W8 520 aaKnown RBP10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 CCDC86Q9H6F5 360 aaKnown RBP10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 WDR26Q9H7D7 661 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 DCAF16Q9NXF7 216 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 ASB4Q9Y574 426 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 ARHGEF33A8MVX0 844 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 ANHXE9PGG2 379 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 RTCAO00442 366 aaKnown RBP10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 SMAD6O43541 496 aaKnown RBP10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 SUSD5O60279 629 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 FMO6PO60774 539 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 ACP2P11117 423 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 HOXC8P31273 242 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 ADH7P40394 386 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 YBEYP58557 167 aaPredicted RBP10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 PSMA6P60900 246 aaKnown RBP10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 PRR5P85299 388 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 TNFRSF17Q02223 184 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 SYPL1Q16563 259 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 HFEQ30201 348 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 TMEM201Q5SNT2 666 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 SFXN4Q6P4A7 337 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 TRIM40Q6P9F5 258 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 CD300LGQ6UXG3 332 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 MRPL10Q7Z7H8 261 aaKnown RBP10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 THEM5Q8N1Q8 247 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 FAM26EQ8N5C1 309 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 MEIOBQ8N635 442 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 OR11G2Q8NGC1 345 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 ADAMTS19Q8TE59 1207 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 FUBP3Q96I24 572 aaKnown RBP eCLIP10.58□□□□□ -0.721e-7■□□□□ 9.3
SEC61A1-202ENST00000424880 LRIG1Q96JA1 1093 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 NRTNQ99748 197 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 TAS2R3Q9NYW6 316 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 EMC3Q9P0I2 261 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 TMEM200CA6NKL6 621 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 DRGXA6NNA5 263 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 REM1O75628 298 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 CD160O95971 181 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 CBSLP0DN79 551 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 CBSP35520 551 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 CTSOP43234 321 aaPredicted RBP10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 B4GALNT1Q00973 533 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 RPE65Q16518 533 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 FCRLBQ6BAA4 426 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 LRRC28Q86X40 367 aaPredicted RBP10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 FAM9CQ8IZT9 166 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 SIRT6Q8N6T7 355 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 XAGE5Q8WWM1 108 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 ADAMTS14Q8WXS8 1223 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 PPCDCQ96CD2 204 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 FAM46AQ96IP4 442 aaKnown RBP10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 IER2Q9BTL4 223 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 CXorf36Q9H7Y0 433 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 SEC14L3Q9UDX4 400 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 NTNG1Q9Y2I2 539 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 NPTNQ9Y639 398 aa10.58□□□□□ -0.72
SEC61A1-202ENST00000424880 MCRIP1C9JLW8 97 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 H3BSH0 61 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 CASC3O15234 703 aaKnown RBP10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 SGCEO43556 437 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 SLC19A2O60779 497 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 GJB5O95377 273 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 ZNF806P0C7X5 589 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 FUT1P19526 365 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 HNF1BP35680 557 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 MAGEB1P43366 347 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 CENPAP49450 140 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 PRKAG1P54619 331 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 CLDN12P56749 244 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 TAP2Q03519 686 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 EEF1A2Q05639 463 aaKnown RBP10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 PLD1Q13393 1074 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 IRF5Q13568 498 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 OCLNQ16625 522 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 AKIRIN2Q53H80 203 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 ZCCHC12Q6PEW1 402 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 CXCL17Q6UXB2 119 aa10.57□□□□□ -0.72
SEC61A1-202ENST00000424880 LINGO2Q7L985 606 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms