RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 GPRC5BQ9NZH0 403 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 ASIC3Q9UHC3 531 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 PRSS50Q9UI38 385 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 FBXO9Q9UK97 447 aaPredicted RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 EFR3BQ9Y2G0 817 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 OR10H1Q9Y4A9 318 aa5.53□□□□□ -1.52
SDCBP-203ENST00000424270 EPPK1P58107 5090 aaKnown RBP5.53□□□□□ -1.52
SDCBP-203ENST00000424270 A0A1B0GUS0 222 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 NCF1BA6NI72 391 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-203ENST00000424270 GOLGA6L10A6NI86 522 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 WASHC1A8K0Z3 465 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 NCF1CA8MVU1 366 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-203ENST00000424270 VSTM5A8MXK1 200 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 B9A039 149 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 C9JVG2 144 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 LYNX1G3V0Z9 82 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 GOLGA6L19H0YKK7 550 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 PRKD3O94806 890 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 MPZL1O95297 269 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 TSPAN15O95858 294 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 YES1P07947 543 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 RNASE1P07998 156 aaKnown RBP5.52□□□□□ -1.53
SDCBP-203ENST00000424270 CT62P0C5K7 136 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 OR4A8P0C604 315 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 LYNX1P0DP58 116 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 GAAP10253 952 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 NCF1P14598 390 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-203ENST00000424270 GALNSP34059 522 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 SFTPDP35247 375 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 SLC1A2P43004 574 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 GDF5P43026 501 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 RFX3P48380 749 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 VPS41P49754 854 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 RWDD2BP57060 319 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 TAF9Q16594 264 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 SWI5Q1ZZU3 235 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 BEAN1Q3B7T3 259 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 LINC01559Q495D7 138 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 ARMCX4Q5H9R4 360 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 RUSC1-AS1Q66K80 236 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 OR52E8Q6IFG1 317 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 AADACL2Q6P093 401 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 KLHL24Q6TFL4 600 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 CCBE1Q6UXH8 406 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-203ENST00000424270 ESPNLQ6ZVH7 1005 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 IKBIPQ70UQ0 350 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 ZNF786Q8N393 782 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 OR4F5Q8NH21 305 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 RNF217Q8TC41 542 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 RGMAQ96B86 450 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 ZNF669Q96BR6 464 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-203ENST00000424270 C1GALT1C1Q96EU7 318 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 PITHD1Q9GZP4 211 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-203ENST00000424270 OR51B5Q9H339 312 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 C7orf69Q9H7B7 122 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 NT5DC2Q9H857 520 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 ANKZF1Q9H8Y5 726 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 PLAC1Q9HBJ0 212 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 ZBTB26Q9HCK0 441 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 TCF7L1Q9HCS4 588 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 PFDN4Q9NQP4 134 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 TNFRSF19Q9NS68 423 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 C20orf96Q9NUD7 363 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-203ENST00000424270 LYARQ9NX58 379 aaKnown RBP5.52□□□□□ -1.53
SDCBP-203ENST00000424270 NTMQ9P121 344 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 PRODH2Q9UF12 536 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 CAPN11Q9UMQ6 739 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 MED16Q9Y2X0 877 aa5.52□□□□□ -1.53
SDCBP-203ENST00000424270 ZNF814B7Z6K7 855 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 PPIHO43447 177 aaKnown RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 PIP5K1CO60331 668 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 EEDO75530 441 aaKnown RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 HAUS5O94927 633 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 IGHV3-9P01782 118 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 CD22P20273 847 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 DRD5P21918 477 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 IGHV1-2P23083 117 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 STIP1P31948 543 aaKnown RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 EVI2BP34910 448 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 HNMTP50135 292 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 PPOXP50336 477 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 XKP51811 444 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 ZNF41P51814 821 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 RAG2P55895 527 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 MYBPC1Q00872 1141 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 LAPTM5Q13571 262 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 ADRM1Q16186 407 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 C2orf68Q2NKX9 166 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 ARL13AQ5H913 290 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 KHDRBS2Q5VWX1 349 aaKnown RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 SAXO2Q658L1 398 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 ACSM5Q6NUN0 579 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 C1orf229Q6ZS94 237 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 FCRLAQ7L513 359 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 VN1R5Q7Z5H4 357 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 UBE3DQ7Z6J8 389 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 PRUNE1Q86TP1 453 aa5.51□□□□□ -1.53
SDCBP-203ENST00000424270 MYLK4Q86YV6 388 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 GSPT2Q8IYD1 628 aaKnown RBP5.51□□□□□ -1.53
SDCBP-203ENST00000424270 SYT14Q8NB59 555 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms