RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 Q9N2J8 555 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 SLCO1B3Q9NPD5 702 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 CLCF1Q9UBD9 225 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 TMED5Q9Y3A6 229 aa13.76□□□□□ -0.21
USB1-202ENST00000423271 EEF1E1-BLOC1S5C9J1V9 151 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 SDHDO14521 159 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 HDAC3O15379 428 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 EEF1E1O43324 174 aaKnown RBP13.75□□□□□ -0.21
USB1-202ENST00000423271 TBX19O60806 448 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 IL33O95760 270 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 IGKV1D-16P01601 117 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 IFI6P09912 130 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 TMIGD3P0DMS9 266 aaPredicted RBP13.75□□□□□ -0.21
USB1-202ENST00000423271 ZNF708P17019 499 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 GABRA3P34903 492 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 GPC1P35052 558 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 DGKQP52824 942 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 ZNHIT3Q15649 155 aaPredicted RBP13.75□□□□□ -0.21
USB1-202ENST00000423271 AAGABQ6PD74 315 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 GALNT10Q86SR1 603 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 WDR75Q8IWA0 830 aaKnown RBP13.75□□□□□ -0.21
USB1-202ENST00000423271 FNDC5Q8NAU1 212 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 PIK3R3Q92569 461 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 C7orf26Q96N11 449 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 GPATCH1Q9BRR8 931 aaKnown RBP13.75□□□□□ -0.21
USB1-202ENST00000423271 AKTIPQ9H8T0 292 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 MEAF6Q9HAF1 191 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 MED4Q9NPJ6 270 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 FAM120CQ9NX05 1096 aaKnown RBP13.75□□□□□ -0.21
USB1-202ENST00000423271 MED11Q9P086 117 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 SH3BP4Q9P0V3 963 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 ABCG2Q9UNQ0 655 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 MRPS18CQ9Y3D5 142 aaKnown RBP13.75□□□□□ -0.21
USB1-202ENST00000423271 ABCA4P78363 2273 aa13.75□□□□□ -0.21
USB1-202ENST00000423271 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 CTAG2O75638 210 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 PRPS2P11908 318 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 CHMP24386 653 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 MAPK1P28482 360 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 OPRM1P35372 400 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 FRKP42685 505 aaPredicted RBP13.74□□□□□ -0.21
USB1-202ENST00000423271 PRKAG1P54619 331 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 DSCR4P56555 118 aaPredicted RBP13.74□□□□□ -0.21
USB1-202ENST00000423271 FLYWCH1Q4VC44 716 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 IL23RQ5VWK5 629 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 APOOLQ6UXV4 268 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 SZRD1Q7Z422 152 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 MARCH3Q86UD3 253 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 GCNT2Q8N0V5 402 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 OR5M1Q8NGP8 315 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 HOXB13Q92826 284 aaPredicted RBP13.74□□□□□ -0.21
USB1-202ENST00000423271 INTS12Q96CB8 462 aaKnown RBP13.74□□□□□ -0.21
USB1-202ENST00000423271 GIMAP5Q96F15 307 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 RMND5BQ96G75 393 aaPredicted RBP13.74□□□□□ -0.21
USB1-202ENST00000423271 MAGEB18Q96M61 343 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 DNAJB12Q9NXW2 375 aaKnown RBP13.74□□□□□ -0.21
USB1-202ENST00000423271 JKAMPQ9P055 326 aa13.74□□□□□ -0.21
USB1-202ENST00000423271 SLCO1B7G3V0H7 640 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 H0YC42 278 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 DYNC1I1O14576 645 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 UTS2O95399 124 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 TGM6O95932 706 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 IL18BPO95998 194 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 ACP2P11117 423 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 HK1P19367 917 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 MAP3K8P41279 467 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 MANFP55145 182 aaKnown RBP13.73□□□□□ -0.21
USB1-202ENST00000423271 TPD52P55327 224 aaPredicted RBP13.73□□□□□ -0.21
USB1-202ENST00000423271 GRAMD1BQ3KR37 738 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 RAET1LQ5VY80 246 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 MAVSQ7Z434 540 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 UBQLNLQ8IYU4 475 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 NUP43Q8NFH3 380 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 ZFP28Q8NHY6 868 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 PIWIL2Q8TC59 973 aaKnown RBP13.73□□□□□ -0.21
USB1-202ENST00000423271 GPR151Q8TDV0 419 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 DUSP19Q8WTR2 217 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 WNT2BQ93097 391 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 DTNBP1Q96EV8 351 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 ZBED6CLQ96FA7 236 aaPredicted RBP13.73□□□□□ -0.21
USB1-202ENST00000423271 LRRC46Q96FV0 321 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 OTUB1Q96FW1 271 aaPredicted RBP13.73□□□□□ -0.21
USB1-202ENST00000423271 UCN2Q96RP3 112 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 TM9SF2Q99805 663 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 WDR55Q9H6Y2 383 aaPredicted RBP13.73□□□□□ -0.21
USB1-202ENST00000423271 MED13LQ71F56 2210 aa13.73□□□□□ -0.21
USB1-202ENST00000423271 ZNF469Q96JG9 3925 aaPredicted RBP13.72□□□□□ -0.21
USB1-202ENST00000423271 GOLGA8QA0A0J9YX86 632 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 GOLGA8OA6NCC3 632 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 TRPC5OSA6NMA1 111 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 GOLGA8NF8WBI6 632 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 SCAMP2O15127 329 aaKnown RBP13.72□□□□□ -0.21
USB1-202ENST00000423271 HCRTR2O43614 444 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 GMFGO60234 142 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 NKX2-2O95096 273 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 RCBTB2O95199 551 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 KCNH1O95259 989 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 LBPP18428 481 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 EPHA3P29320 983 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 DNAJA1P31689 397 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms