RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 LDLRP01130 860 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 IGKV1D-16P01601 117 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 RHCEP18577 417 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 ATP6V1C1P21283 382 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 TBXA2RP21731 343 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 F8A1P23610 371 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 NRG3P56975 720 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 CHAF1BQ13112 559 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 NRF1Q16656 503 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 KLHL26Q53HC5 615 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZNF311Q5JNZ3 666 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 OGFRL1Q5TC84 451 aaPredicted RBP13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 TMEM81Q6P7N7 255 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 TSEN54Q7Z6J9 526 aaKnown RBP13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 RAB43Q86YS6 212 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZDHHC21Q8IVQ6 265 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 TAGAPQ8N103 731 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 OR4N2Q8NGD1 307 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 LRTOMTQ8WZ04 291 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 PROX1Q92786 737 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 C8orf44Q96CB5 159 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZG16BQ96DA0 208 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 NRBF2Q96F24 287 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 OTUB1Q96FW1 271 aaPredicted RBP13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 RMND5BQ96G75 393 aaPredicted RBP13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 ARHGDIGQ99819 225 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 PKP2Q99959 881 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 NTN4Q9HB63 628 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 CACYBPQ9HB71 228 aaKnown RBP13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 HHATLQ9HCP6 504 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 UBQLN4Q9NRR5 601 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 MYOTQ9UBF9 498 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 KCNE5Q9UJ90 142 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 MKLN1Q9UL63 735 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 ZNF443Q9Y2A4 671 aaPredicted RBP13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 SLC9A8Q9Y2E8 581 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 RAXQ9Y2V3 346 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 CHST2Q9Y4C5 530 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 SDK2Q58EX2 2172 aa13.15□□□□□ -0.3
SHMT1P1-201ENST00000419974 NSG1A0A0A6YYJ2 146 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 CDHR4A6H8M9 788 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 PRAMEF25A6NGN4 478 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 H0YJX3 145 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 DNAJB5O75953 348 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 EPPINO95925 133 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 IFNW1P05000 195 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 IL7RP16871 459 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 ABCD3P28288 659 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 PTDSS1P48651 473 aaKnown RBP13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 ERFP50548 548 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 VLDLRP98155 873 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 EFR3AQ14156 821 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 FLYWCH1Q4VC44 716 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 HMBOX1Q6NT76 420 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 JMJD6Q6NYC1 403 aaPredicted RBP13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 FIGNL1Q6PIW4 674 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 GALNT10Q86SR1 603 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 ZNF605Q86T29 641 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 SMYD1Q8NB12 490 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 ZNF527Q8NB42 609 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 CATSPER1Q8NEC5 780 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 TTC9Q92623 222 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 KIAA1143Q96AT1 154 aaPredicted RBP13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 TPD52L3Q96J77 140 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 DHRS1Q96LJ7 313 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 ZNF300Q96RE9 604 aaPredicted RBP13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 VCX3BQ9H321 246 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 FBXO34Q9NWN3 711 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 KLHL28Q9NXS3 571 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 ENPP4Q9Y6X5 453 aa13.14□□□□□ -0.31
SHMT1P1-201ENST00000419974 TRBV11-1A0A0K0K1C0 115 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 ADAMDEC1O15204 470 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 TPST1O60507 370 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 TIPRLO75663 272 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 NADKO95544 446 aaPredicted RBP13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 BAG2O95816 211 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 OPN1SWP03999 348 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 SERPINA7P05543 415 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 DCTP40126 519 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 TMED10P49755 219 aaKnown RBP13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 NR0B1P51843 470 aaKnown RBP13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 SOX8P57073 446 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 FGFBP1Q14512 234 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 GPR68Q15743 365 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 MAPK14Q16539 360 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 CCNJQ5T5M9 372 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 TCTN3Q6NUS6 607 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 MRGPREQ86SM8 312 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 SVOPLQ8N434 492 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 PACRGLQ8N7B6 248 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 FAM71CQ8NEG0 241 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 PHF10Q8WUB8 498 aaKnown RBP13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 SECISBP2Q96T21 854 aaKnown RBP13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 MESP1Q9BRJ9 268 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 AMBRA1Q9C0C7 1298 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 EXOSC3Q9NQT5 275 aaKnown RBP13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 ABCG2Q9UNQ0 655 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 SLC35A3Q9Y2D2 325 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 NPFFR2Q9Y5X5 522 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms