RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 NEFHP12036 1026 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 SDC1P18827 310 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 GPC1P35052 558 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 MAP3K8P41279 467 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 FRKP42685 505 aaPredicted RBP8.52□□□□□ -1.05
NUP50-205ENST00000419387 RFX3P48380 749 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 SUCLG1P53597 346 aaKnown RBP8.52□□□□□ -1.05
NUP50-205ENST00000419387 MANFP55145 182 aaKnown RBP8.52□□□□□ -1.05
NUP50-205ENST00000419387 CLDN15P56746 228 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 EEFSECP57772 596 aaKnown RBP8.52□□□□□ -1.05
NUP50-205ENST00000419387 IFFO1Q0D2I5 559 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 C17orf67Q0P5P2 114 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 HSPB3Q12988 150 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 STX5Q13190 355 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 KRT71Q3SY84 523 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 GLYR1Q49A26 553 aaPredicted RBP8.52□□□□□ -1.05
NUP50-205ENST00000419387 VPS26BQ4G0F5 336 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 RFTN2Q52LD8 501 aaPredicted RBP8.52□□□□□ -1.05
NUP50-205ENST00000419387 ZNF385BQ569K4 471 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 CEP85LQ5SZL2 805 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 RAET1LQ5VY80 246 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 KANK2Q63ZY3 851 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 OR2A2Q6IF42 318 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 ANKRD26P1Q6NSI1 321 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 UBQLNLQ8IYU4 475 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 GCNT2Q8N0V5 402 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 CHDHQ8NE62 594 aaPredicted RBP8.52□□□□□ -1.05
NUP50-205ENST00000419387 NUP43Q8NFH3 380 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 OR2T11Q8NH01 316 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 ZFP28Q8NHY6 868 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 GPR151Q8TDV0 419 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 PIK3R3Q92569 461 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 HOXB13Q92826 284 aaPredicted RBP8.52□□□□□ -1.05
NUP50-205ENST00000419387 CIDECQ96AQ7 238 aaPredicted RBP8.52□□□□□ -1.05
NUP50-205ENST00000419387 PPCDCQ96CD2 204 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 TLCD1Q96CP7 247 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 ZBED6CLQ96FA7 236 aaPredicted RBP8.52□□□□□ -1.05
NUP50-205ENST00000419387 DACH2Q96NX9 599 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 CCT7Q99832 543 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 PIGQQ9BRB3 760 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 YIPF4Q9BSR8 244 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 TMBIM4Q9HC24 238 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 EQTNQ9NQ60 294 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 GALNT8Q9NY28 637 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 SH3BP4Q9P0V3 963 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 BAIAP2L1Q9UHR4 511 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 PACSIN3Q9UKS6 424 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 PLEKHA6Q9Y2H5 1048 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 TMED5Q9Y3A6 229 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 DNAJC15Q9Y5T4 150 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 MPDZO75970 2070 aa8.52□□□□□ -1.05
NUP50-205ENST00000419387 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 IGLV3-32A0A0A0MS00 114 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 A0A1W2PNV4 684 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 OR2M5A3KFT3 312 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 SH3D21A4FU49 640 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 SLC22A20A6NK97 555 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 H0YC42 278 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 MSTNO14793 375 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 LSM1O15116 133 aaKnown RBP8.51□□□□□ -1.05
NUP50-205ENST00000419387 NPHS1O60500 1241 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 UTS2O95399 124 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 ANGPTL1O95841 491 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 IGKV1D-16P01601 117 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 CD99P14209 185 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 ALDH3A1P30838 453 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 ARRB2P32121 409 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 PRKAG1P54619 331 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 TPD52P55327 224 aaPredicted RBP8.51□□□□□ -1.05
NUP50-205ENST00000419387 RPL38P63173 70 aaKnown RBP8.51□□□□□ -1.05
NUP50-205ENST00000419387 PRR5P85299 388 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 PDE7AQ13946 482 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 GRAMD1BQ3KR37 738 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 UGT3A2Q3SY77 523 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 GALNTL6Q49A17 601 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 APOOLQ6UXV4 268 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 R3HCC1LQ7Z5L2 792 aaKnown RBP8.51□□□□□ -1.05
NUP50-205ENST00000419387 CAMKMTQ7Z624 323 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 CDRT4Q8N9R6 151 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 OR5M1Q8NGP8 315 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 CLHC1Q8NHS4 586 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 FAM110BQ8TC76 370 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 TCP10LQ8TDR4 215 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 FIG4Q92562 907 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 SLC9A6Q92581 669 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 ARL8AQ96BM9 186 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 STARD4Q96DR4 205 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 MTERF3Q96E29 417 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 C1GALT1C1Q96EU7 318 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 GIMAP5Q96F15 307 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 APOPT1Q96IL0 206 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 TSSK3Q96PN8 268 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 TBL1XR1Q9BZK7 514 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 PLEKHF2Q9H8W4 249 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 EML4Q9HC35 981 aaKnown RBP8.51□□□□□ -1.05
NUP50-205ENST00000419387 ACSS1Q9NUB1 689 aaPredicted RBP8.51□□□□□ -1.05
NUP50-205ENST00000419387 NTMQ9P121 344 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 NDRG3Q9UGV2 375 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 TRAF6Q9Y4K3 522 aa8.51□□□□□ -1.05
NUP50-205ENST00000419387 ANKHD1Q8IWZ3 2542 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms