RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 MAT1AQ00266 395 aaKnown RBP7.8□□□□□ -1.16
USP54-203ENST00000418501 TMED1Q13445 227 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 C16orf72Q14CZ0 275 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 ENTPD8Q5MY95 495 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 TYW3Q6IPR3 259 aaKnown RBP7.8□□□□□ -1.16
USP54-203ENST00000418501 TCTN3Q6NUS6 607 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 PODNL1Q6PEZ8 512 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 FIGNL1Q6PIW4 674 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 FRRS1Q6ZNA5 592 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 RTL4Q6ZR62 310 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 VRK2Q86Y07 508 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 CADM2Q8N3J6 435 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 CLDN22Q8N7P3 220 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 OR2T33Q8NG76 320 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 OR4C15Q8NGM1 316 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 MR1Q95460 341 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 CCDC74BQ96LY2 380 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 AICDAQ9GZX7 198 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 ABI3Q9P2A4 366 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 SERINC4A6NH21 518 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 ZFAND5O76080 213 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 KCNK2O95069 426 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 GP1BBP13224 206 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 ICAM2P13598 275 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 JUNBP17275 347 aaPredicted RBP7.8□□□□□ -1.16
USP54-203ENST00000418501 CCKBRP32239 447 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 OR1D4P47884 311 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 MEP1AQ16819 746 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 DCAF12Q5T6F0 453 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 HSDL2Q6YN16 418 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 ZNF836Q6ZNA1 936 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 GRAMD2AQ8IUY3 354 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 C17orf47Q8NEP4 570 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 TP53INP1Q96A56 240 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 DHRS1Q96LJ7 313 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 LRFN5Q96NI6 719 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 TGIF2Q9GZN2 237 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 PRDM6Q9NQX0 595 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 ACAD8Q9UKU7 415 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 PCDHGB7Q9Y5F8 929 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 PCDHGB5Q9Y5G0 923 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 CDH10Q9Y6N8 788 aa7.8□□□□□ -1.16
USP54-203ENST00000418501 PCM1Q15154 2024 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 A0A1B0GVG6 124 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 A8MUA0 341 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 ALOX12BO75342 701 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 OR6A2O95222 327 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 JMJD7P0C870 316 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 ATXN8OSP0DMR3 200 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 NAGAP17050 411 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 CBLP22681 906 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 CRHBPP24387 322 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 PIGAP37287 484 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 PPP1CAP62136 330 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 PIN1Q13526 163 aaPredicted RBP7.79□□□□□ -1.16
USP54-203ENST00000418501 APOFQ13790 326 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 EXT1Q16394 746 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 NADK2Q4G0N4 442 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 MRPL2Q5T653 305 aaKnown RBP7.79□□□□□ -1.16
USP54-203ENST00000418501 C1orf189Q5VU69 101 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 WBP2NLQ6ICG8 309 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 ZNF544Q6NX49 715 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 TBPL2Q6SJ96 375 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 WDR36Q8NI36 951 aaKnown RBP7.79□□□□□ -1.16
USP54-203ENST00000418501 CTHRC1Q96CG8 243 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 MBOAT4Q96T53 435 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 CRB3Q9BUF7 120 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 SLC19A3Q9BZV2 496 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 RASSF1Q9NS23 344 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 DSPPQ9NZW4 1301 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 IL33O95760 270 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 POU2F1P14859 743 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 ITIH1P19827 911 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 MAN2A2P49641 1150 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 SNRPGP62308 76 aaKnown RBP7.79□□□□□ -1.16
USP54-203ENST00000418501 PPP1R8Q12972 351 aaKnown RBP7.79□□□□□ -1.16
USP54-203ENST00000418501 RAPSNQ13702 412 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 GINS1Q14691 196 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 MFSD13AQ14CX5 517 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 ZNF141Q15928 474 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.79□□□□□ -1.16
USP54-203ENST00000418501 SLX4IPQ5VYV7 408 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 GUSBP11Q6P575 273 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 PRR23CQ6ZRP0 262 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 ZNF248Q8NDW4 579 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 KBTBD8Q8NFY9 601 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 PHOSPHO1Q8TCT1 267 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 TMEM239Q8WW34 195 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 GIMAP5Q96F15 307 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 SERINC1Q9NRX5 453 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 SLC39A1Q9NY26 324 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 RHCGQ9UBD6 479 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 KLHL21Q9UJP4 597 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 SLC6A5Q9Y345 797 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 C4orf51C9J302 202 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 CHP2O43745 196 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 IFI30P13284 250 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 TNFRSF1BP20333 461 aa7.79□□□□□ -1.16
USP54-203ENST00000418501 ITPKBP27987 946 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms