RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 HBEGFQ99075 208 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 SERPINI1Q99574 410 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 EBF4Q9BQW3 602 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 ACPTQ9BZG2 426 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 SEMA4CQ9C0C4 833 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 SYNDIG1Q9H7V2 258 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 ZNF304Q9HCX3 659 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 FAM60AQ9NP50 221 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 PDE7BQ9NP56 450 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 TCF7L2Q9NQB0 619 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 SOHLH2Q9NX45 425 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 VPS29Q9UBQ0 182 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 ARL2BPQ9Y2Y0 163 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 CCL27Q9Y4X3 112 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 PCDHGA1Q9Y5H4 931 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 DMDP11532 3685 aa5.49□□□□□ -1.53
NIFKP3-201ENST00000417799 PTPRZ1P23471 2315 aaPredicted RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 FAM186AA6NE01 2351 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 HEATR5BQ9P2D3 2071 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 LRIT2A6NDA9 550 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 E9PBE3 544 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 TXNDC9O14530 226 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 LSM1O15116 133 aaKnown RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 UBDO15205 165 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 NDUFS4O43181 175 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 HCRTR1O43613 425 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 KLHL41O60662 606 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 SRPX2O60687 465 aaPredicted RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 PEX11AO75192 247 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 SH3BGRLO75368 114 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 SEC22BO75396 215 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 RBMXL2O75526 392 aaKnown RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 RSL1D1O76021 490 aaKnown RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 NEURL1O76050 574 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 SEMA3DO95025 777 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 ETHE1O95571 254 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 STATHP02808 62 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 LCKP06239 509 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 SLC35G6P0C7Q6 338 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 PRR35P0CG20 571 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 CDK4P11802 303 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 LBPP18428 481 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 CSRP1P21291 193 aaKnown RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 HNRNPH1P31943 449 aaKnown RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 GABRA4P48169 554 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 VSX2P58304 361 aaPredicted RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 STXBP1P61764 594 aaKnown RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 EMX2Q04743 252 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 ZFP36L1Q07352 338 aaKnown RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 ACSM2AQ08AH3 577 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 MAD2L1Q13257 205 aaPredicted RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 CUL3Q13618 768 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 SMU1Q2TAY7 513 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 ADPRMQ3LIE5 342 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 RFTN2Q52LD8 501 aaPredicted RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 TMEM35AQ53FP2 167 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 C6orf136Q5SQH8 315 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 WASHC2DQ5SRD0 308 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 MANEAQ5SRI9 462 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 KHDRBS2Q5VWX1 349 aaKnown RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 METTL21CQ5VZV1 264 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 ACSM2BQ68CK6 577 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 FRMPD2BQ6IN97 320 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 SPATA19Q7Z5L4 167 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 ZFAND4Q86XD8 727 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 KIAA2013Q8IYS2 634 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 METTL4Q8N3J2 472 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 CAMKVQ8NCB2 501 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 DNAAF1Q8NEP3 725 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 NFKBIDQ8NI38 313 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 NT5CQ8TCD5 201 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 N4BP2L2Q92802 583 aaPredicted RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 MS4A6EQ96DS6 147 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 RILPQ96NA2 401 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 ZNF285Q96NJ3 590 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 FCRL4Q96PJ5 515 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 TEFMQ96QE5 360 aaKnown RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 F2RL3Q96RI0 385 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 CENPKQ9BS16 269 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 QTRT1Q9BXR0 403 aaKnown RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 MS4A8Q9BY19 250 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 NLNQ9BYT8 704 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 OR51B5Q9H339 312 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 KLHL31Q9H511 634 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 LRTM1Q9HBL6 345 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 PAPOLBQ9NRJ5 636 aaKnown RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 C1orf109Q9NX04 203 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 AHSPQ9NZD4 102 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 HEY2Q9UBP5 337 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 AASSQ9UDR5 926 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 GIMAP2Q9UG22 337 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 UTS2RQ9UKP6 389 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 PLCL2Q9UPR0 1127 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 CAMK2AQ9UQM7 478 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 LAMP3Q9UQV4 416 aa5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 SNRNP200O75643 2136 aaKnown RBP5.48□□□□□ -1.53
NIFKP3-201ENST00000417799 GVINP1Q7Z2Y8 2422 aa5.47□□□□□ -1.53
NIFKP3-201ENST00000417799 PCNX2A6NKB5 2137 aa5.47□□□□□ -1.53
NIFKP3-201ENST00000417799 A0A1W2PPH5 198 aa5.47□□□□□ -1.53
NIFKP3-201ENST00000417799 URADA6NGE7 173 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms