RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 ANGPTL1O95841 491 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 LAMP1P11279 417 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 EFNA1P20827 205 aaPredicted RBP16.14■□□□□ 0.17
CPNE1-210ENST00000416778 EEF1A1P68104 462 aaKnown RBP16.14■□□□□ 0.17
CPNE1-210ENST00000416778 STX5Q13190 355 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 GANABQ14697 944 aaKnown RBP16.14■□□□□ 0.17
CPNE1-210ENST00000416778 TMEM44Q2T9K0 475 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 EEF1A1P5Q5VTE0 462 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 MREGQ8N565 214 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 OR7A2PQ8NGA2 310 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 OR5M1Q8NGP8 315 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 AGR3Q8TD06 166 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 SLC9A6Q92581 669 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 C1GALT1C1Q96EU7 318 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 RMND5BQ96G75 393 aaPredicted RBP16.14■□□□□ 0.17
CPNE1-210ENST00000416778 DOCK7Q96N67 2140 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 GPATCH1Q9BRR8 931 aaKnown RBP16.14■□□□□ 0.17
CPNE1-210ENST00000416778 PARD6BQ9BYG5 372 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 LIME1Q9H400 295 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 SIRT3Q9NTG7 399 aaPredicted RBP16.14■□□□□ 0.17
CPNE1-210ENST00000416778 FBXO34Q9NWN3 711 aa16.14■□□□□ 0.17
CPNE1-210ENST00000416778 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 OR2M5A3KFT3 312 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 A8MXE2 369 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 EEF1E1-BLOC1S5C9J1V9 151 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 ALG1L2C9J202 215 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 H0YC42 278 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 EEF1E1O43324 174 aaKnown RBP16.13■□□□□ 0.17
CPNE1-210ENST00000416778 TNFRSF21O75509 655 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 TNFSF13O75888 250 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 NGFRP08138 427 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 TBXA2RP21731 343 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 DIO3P55073 304 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 TPD52P55327 224 aaPredicted RBP16.13■□□□□ 0.17
CPNE1-210ENST00000416778 SORDQ00796 357 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 DUSP5Q16690 384 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 IL23RQ5VWK5 629 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 MFSD12Q6NUT3 480 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 ZAR1Q86SH2 424 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 GRAMD2AQ8IUY3 354 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 COQ8BQ96D53 544 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 FAM120BQ96EK7 910 aaKnown RBP16.13■□□□□ 0.17
CPNE1-210ENST00000416778 RBM24Q9BX46 236 aaKnown RBP16.13■□□□□ 0.17
CPNE1-210ENST00000416778 TBL1XR1Q9BZK7 514 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 ACBD3Q9H3P7 528 aa16.13■□□□□ 0.17
CPNE1-210ENST00000416778 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.13■□□□□ 0.17
CPNE1-210ENST00000416778 V9GYY5 206 aaPredicted RBP16.13■□□□□ 0.17
CPNE1-210ENST00000416778 A0A1W2PRB8 838 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 SCAMP2O15127 329 aaKnown RBP16.12■□□□□ 0.17
CPNE1-210ENST00000416778 CTIFO43310 598 aaKnown RBP16.12■□□□□ 0.17
CPNE1-210ENST00000416778 LYPLA1O75608 230 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-210ENST00000416778 CRHP06850 196 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 MAPK1P28482 360 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 IST1P53990 364 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 CLDN20P56880 219 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 EEFSECP57772 596 aaKnown RBP16.12■□□□□ 0.17
CPNE1-210ENST00000416778 PTGR1Q14914 329 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.12■□□□□ 0.17
CPNE1-210ENST00000416778 ATP6AP1LQ52LC2 224 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 CPTPQ5TA50 214 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 RAET1LQ5VY80 246 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 FIGNL1Q6PIW4 674 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 CHMP1BQ7LBR1 199 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 GALNT10Q86SR1 603 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 CDC20BQ86Y33 519 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 NUDCD3Q8IVD9 361 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 RIMKLAQ8IXN7 391 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 UBQLNLQ8IYU4 475 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 GCNT2Q8N0V5 402 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 MEIOBQ8N635 442 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 PSMA8Q8TAA3 256 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 OR5P2Q8WZ92 322 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 STARD4Q96DR4 205 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 MS4A4EQ96PG1 132 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 PIGQQ9BRB3 760 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 YIPF4Q9BSR8 244 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 CLEC4MQ9H2X3 399 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-210ENST00000416778 PIGMQ9H3S5 423 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 ZNF395Q9H8N7 513 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-210ENST00000416778 HRNRQ86YZ3 2850 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-210ENST00000416778 ITPR3Q14573 2671 aa16.12■□□□□ 0.17
CPNE1-210ENST00000416778 A0A1W2PNV4 684 aa16.11■□□□□ 0.17
CPNE1-210ENST00000416778 NDUFB5O43674 189 aa16.11■□□□□ 0.17
CPNE1-210ENST00000416778 ITM2AO43736 263 aa16.11■□□□□ 0.17
CPNE1-210ENST00000416778 OXSR1O95747 527 aaPredicted RBP16.11■□□□□ 0.17
CPNE1-210ENST00000416778 HMGN2P05204 90 aaKnown RBP16.11■□□□□ 0.17
CPNE1-210ENST00000416778 ALOX5P09917 674 aa16.11■□□□□ 0.17
CPNE1-210ENST00000416778 DDX5P17844 614 aaKnown RBP16.11■□□□□ 0.17
CPNE1-210ENST00000416778 LCN1P31025 176 aa16.11■□□□□ 0.17
CPNE1-210ENST00000416778 RPL3P39023 403 aaKnown RBP16.11■□□□□ 0.17
CPNE1-210ENST00000416778 ZNF844Q08AG5 666 aa16.11■□□□□ 0.17
CPNE1-210ENST00000416778 LUZP2Q86TE4 346 aa16.11■□□□□ 0.17
CPNE1-210ENST00000416778 KRTCAP2Q8N6L1 136 aa16.11■□□□□ 0.17
CPNE1-210ENST00000416778 FBXO30Q8TB52 745 aa16.11■□□□□ 0.17
CPNE1-210ENST00000416778 FIG4Q92562 907 aa16.11■□□□□ 0.17
CPNE1-210ENST00000416778 C1orf50Q9BV19 199 aa16.11■□□□□ 0.17
CPNE1-210ENST00000416778 UBQLN4Q9NRR5 601 aa16.11■□□□□ 0.17
CPNE1-210ENST00000416778 GIN1Q9NXP7 522 aa16.11■□□□□ 0.17
CPNE1-210ENST00000416778 AP4B1Q9Y6B7 739 aa16.11■□□□□ 0.17
CPNE1-210ENST00000416778 ABCA4P78363 2273 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms