RNA–Protein interactions for RNA: ENST00000416081.5

SSFA2-204, Transcript of Sperm-specific antigen 2, humanhuman

TSL 1 (best)

Gene SSFA2, Length 5,067 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-204ENST00000416081 RGS7BPQ6MZT1 257 aaPredicted RBP6.86□□□□□ -1.31
SSFA2-204ENST00000416081 FAM180BQ6P0A1 224 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 SMARCD3Q6STE5 483 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 TMEM91Q6ZNR0 172 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 FAM83HQ6ZRV2 1179 aaPredicted RBP6.86□□□□□ -1.31
SSFA2-204ENST00000416081 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.86□□□□□ -1.31
SSFA2-204ENST00000416081 ZNF687Q8N1G0 1237 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 DCAF4L2Q8NA75 395 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 KCT2Q8NC54 265 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 FANK1Q8TC84 345 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 FCAMRQ8WWV6 532 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 TIFAQ96CG3 184 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 NEURL3Q96EH8 262 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 YIPF4Q9BSR8 244 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 NKX6-2Q9C056 277 aaPredicted RBP6.86□□□□□ -1.31
SSFA2-204ENST00000416081 DNTTIP1Q9H147 329 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 NOX3Q9HBY0 568 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 DMRT3Q9NQL9 472 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 RCE1Q9Y256 329 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 A0A1B0GUH1 482 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 SYNDIG1LA6NDD5 238 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 KDM4EB2RXH2 506 aaPredicted RBP6.86□□□□□ -1.31
SSFA2-204ENST00000416081 J3QLW9 94 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 K7ERQ8 282 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 PRAMEF4O60810 478 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 B3GALNT1O75752 331 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 KRT33AO76009 404 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 GAAP10253 952 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 ZNF19P17023 458 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 HTR1FP30939 366 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 NTSP30990 170 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 CD79BP40259 229 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 HOXA1P49639 335 aaPredicted RBP6.86□□□□□ -1.31
SSFA2-204ENST00000416081 SEC61A1P61619 476 aaKnown RBP6.86□□□□□ -1.31
SSFA2-204ENST00000416081 TSPAN31Q12999 210 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 GRM7Q14831 915 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 ETFDHQ16134 617 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 ENTPD8Q5MY95 495 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 PRAMEF9Q5VWM5 478 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 FAM71E1Q6IPT2 247 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 C1orf94Q6P1W5 598 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 ZDHHC1Q8WTX9 485 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 HERVK_113Q902F9 699 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 SMPDL3AQ92484 453 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 UPF1Q92900 1129 aaKnown RBP eCLIP6.86□□□□□ -1.31
SSFA2-204ENST00000416081 BBS4Q96RK4 519 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 C19orf43Q9BQ61 176 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 MED17Q9NVC6 651 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 TAS2R10Q9NYW0 307 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 KLHL9Q9P2J3 617 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 BACE2Q9Y5Z0 518 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 MCM3APO60318 1980 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 SMAD6O43541 496 aaKnown RBP6.86□□□□□ -1.31
SSFA2-204ENST00000416081 GJB5O95377 273 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 SLC16A8O95907 504 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 ZNF806P0C7X5 589 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 PRMT2P55345 433 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 ACSM1Q08AH1 577 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 CRTC1Q6UUV9 634 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 ADCK2Q7Z695 626 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 C11orf96Q7Z7L8 435 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 ARIH2OSQ8N7S6 290 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 GPR32P1Q8NGA4 272 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 SLC5A11Q8WWX8 675 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 NEIL2Q969S2 332 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 ZDHHC6Q9H6R6 413 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 NDRG3Q9UGV2 375 aa6.86□□□□□ -1.31
SSFA2-204ENST00000416081 NUP214P35658 2090 aaPredicted RBP6.85□□□□□ -1.31
SSFA2-204ENST00000416081 OR14I1A6ND48 311 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 NPIPB15A6NHN6 443 aaPredicted RBP6.85□□□□□ -1.31
SSFA2-204ENST00000416081 CPSF4LA6NMK7 179 aaKnown RBP6.85□□□□□ -1.31
SSFA2-204ENST00000416081 ANXA2P2A6NMY6 339 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 NMBP08949 121 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 C1GALT1C1LP0DN25 315 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 DRD2P14416 443 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 FNTBP49356 437 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 SGSHP51688 502 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 DLX5P56178 289 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 OR10A3P58181 314 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 SHC2P98077 582 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 MAPK14Q16539 360 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 RAB11FIP2Q7L804 512 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 NAXDQ8IW45 347 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 POGLUT1Q8NBL1 392 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 PXT1Q8NFP0 134 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 CNOT9Q92600 299 aaKnown RBP6.85□□□□□ -1.31
SSFA2-204ENST00000416081 YIPF5Q969M3 257 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 TREX2Q9BQ50 279 aaPredicted RBP6.85□□□□□ -1.31
SSFA2-204ENST00000416081 SEC22CQ9BRL7 303 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 ELAC1Q9H777 363 aaKnown RBP6.85□□□□□ -1.31
SSFA2-204ENST00000416081 NLGN3Q9NZ94 848 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 H3BNC9 293 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 FOXE1O00358 373 aaPredicted RBP6.85□□□□□ -1.31
SSFA2-204ENST00000416081 SIX6O95475 246 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 SERPIND1P05546 499 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 SNRPBP14678 240 aaKnown RBP6.85□□□□□ -1.31
SSFA2-204ENST00000416081 CAPZA2P47755 286 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 CCR9P51686 369 aa6.85□□□□□ -1.31
SSFA2-204ENST00000416081 POLR2LP62875 67 aaKnown RBP6.85□□□□□ -1.31
SSFA2-204ENST00000416081 CPOQ8IVL8 374 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms