RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 MASP1P48740 699 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 RNF144AP50876 292 aaPredicted RBP12.73□□□□□ -0.37
SNHG17-202ENST00000414142 LSM11P83369 360 aaKnown RBP eCLIP12.73□□□□□ -0.373e-10■■■■■ 36.9
SNHG17-202ENST00000414142 SIGLEC14Q08ET2 396 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 PLK5Q496M5 336 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 MFSD4BQ5TF39 518 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 PRAMEF17Q5VTA0 474 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 WDR74Q6RFH5 385 aaPredicted RBP12.73□□□□□ -0.37
SNHG17-202ENST00000414142 ZNF730Q6ZMV8 503 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 CCDC81Q6ZN84 652 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 LINC00299Q6ZSB3 139 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 PTCHD4Q6ZW05 846 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 ZER1Q7Z7L7 766 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 EDAQ92838 391 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 SLC41A2Q96JW4 573 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 PTCHD1Q96NR3 888 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 NUDT22Q9BRQ3 303 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 COPS4Q9BT78 406 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 LMF2Q9BU23 707 aaKnown RBP12.73□□□□□ -0.37
SNHG17-202ENST00000414142 AMBNQ9NP70 447 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 ERVK-19Q9WJR5 959 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 CLDN16Q9Y5I7 305 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 TNRC6BQ9UPQ9 1833 aaKnown RBP12.73□□□□□ -0.37
SNHG17-202ENST00000414142 A0A087WUU8 490 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 A0A1B0GTQ1 180 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 CLCA1A8K7I4 914 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 H3BMH7 237 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 MPZL2O60487 215 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 PRAMEF2O60811 474 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 FADS2O95864 444 aaKnown RBP12.73□□□□□ -0.37
SNHG17-202ENST00000414142 CFIP05156 583 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 TDGF1P13385 188 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 RPS4Y1P22090 263 aaKnown RBP12.73□□□□□ -0.37
SNHG17-202ENST00000414142 PSMB9P28065 219 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 PSG6Q00889 435 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 COX10Q12887 443 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 SERTAD2Q14140 314 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 SPCS2Q15005 226 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 NR0B2Q15466 257 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 HLA-BQ31612 363 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 TBC1D25Q3MII6 688 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 FLYWCH1Q4VC44 716 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 MRPL2Q5T653 305 aaKnown RBP12.73□□□□□ -0.37
SNHG17-202ENST00000414142 UBE2UQ5VVX9 321 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 C1orf94Q6P1W5 598 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 PRSS42Q7Z5A4 293 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 RANBP3LQ86VV4 465 aaPredicted RBP12.73□□□□□ -0.37
SNHG17-202ENST00000414142 P2RY8Q86VZ1 359 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.73□□□□□ -0.37
SNHG17-202ENST00000414142 HOXB13Q92826 284 aaPredicted RBP12.73□□□□□ -0.37
SNHG17-202ENST00000414142 PMM1Q92871 262 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 SLC41A3Q96GZ6 507 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 ARMC7Q9H6L4 198 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 POLE3Q9NRF9 147 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 TBC1D23Q9NUY8 699 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 CHCHD3Q9NX63 227 aaKnown RBP12.73□□□□□ -0.37
SNHG17-202ENST00000414142 KCNE5Q9UJ90 142 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 SLC6A14Q9UN76 642 aa12.73□□□□□ -0.37
SNHG17-202ENST00000414142 SEC16AO15027 2179 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 FOXD2O60548 495 aaPredicted RBP12.72□□□□□ -0.37
SNHG17-202ENST00000414142 NID1P14543 1247 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 GABRB1P18505 474 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 NUDT6P53370 316 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 BIKQ13323 160 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 AQP6Q13520 282 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 PRICKLE2Q7Z3G6 844 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 GDF7Q7Z4P5 450 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 MEX3DQ86XN8 651 aaKnown RBP12.72□□□□□ -0.37
SNHG17-202ENST00000414142 KMT5CQ86Y97 462 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 GNPDA2Q8TDQ7 276 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 MVB12AQ96EY5 273 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 ZNF578Q96N58 590 aaPredicted RBP12.72□□□□□ -0.37
SNHG17-202ENST00000414142 PELOQ9BRX2 385 aaKnown RBP12.72□□□□□ -0.37
SNHG17-202ENST00000414142 ANKRD19PQ9H560 264 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 PALMDQ9NP74 551 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 CLN6Q9NWW5 311 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 SEMA5BQ9P283 1151 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 GMEB2Q9UKD1 530 aa12.72□□□□□ -0.37
SNHG17-202ENST00000414142 OR5F1O95221 314 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 GKN3PP0CG01 181 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 GSTM3P21266 225 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 BMXP51813 675 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 SLX4IPQ5VYV7 408 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 CASP12Q6UXS9 341 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 CD300LDQ6UXZ3 194 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 KANSL1Q7Z3B3 1105 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 ZAR1Q86SH2 424 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 NKAIN4Q8IVV8 208 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 ZNF614Q8N883 585 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 OR4N2Q8NGD1 307 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 PIGXQ8TBF5 258 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 SAP25Q8TEE9 199 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 TRUB1Q8WWH5 349 aaKnown RBP12.71□□□□□ -0.37
SNHG17-202ENST00000414142 VSTM2LQ96N03 204 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 DPYSL5Q9BPU6 564 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 OR10A5Q9H207 317 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 PNO1Q9NRX1 252 aaKnown RBP12.71□□□□□ -0.37
SNHG17-202ENST00000414142 LANCL2Q9NS86 450 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 FGF21Q9NSA1 209 aa12.71□□□□□ -0.37
SNHG17-202ENST00000414142 FKBP14Q9NWM8 211 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms