RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 DPH1Q9BZG8 443 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 ZNF224Q9NZL3 707 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 PRELID1Q9Y255 219 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 MTCL1Q9Y4B5 1905 aaKnown RBP13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 TEX13CA0A0J9YWL9 993 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 A0A1W2PRG6 482 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 PRG2P13727 222 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 PPP2R1BP30154 601 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 SMIM11AP58511 58 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 LGALSLQ3ZCW2 172 aaPredicted RBP13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 C9orf64Q5T6V5 341 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 SFRP4Q6FHJ7 346 aaPredicted RBP13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 ZNF767PQ75MW2 155 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 DPPA4Q7L190 304 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 SIAH3Q8IW03 269 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 OR4N5Q8IXE1 308 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 OR51L1Q8NGJ5 315 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 OR9A2Q8NGT5 310 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 ANGPTL6Q8NI99 470 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 CD99L2Q8TCZ2 262 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 OSGEPL1Q9H4B0 414 aa13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 PPIEQ9UNP9 301 aaKnown RBP13.63□□□□□ -0.23
SEMA3F-202ENST00000413852 THSD7BQ9C0I4 1608 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 CDK2AP1O14519 115 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 HPXP02790 462 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 FCER2P06734 321 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 ADRB1P08588 477 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 PKLRP30613 574 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 EPHA5P54756 1037 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 DSG2Q14126 1118 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 ST3GAL2Q16842 350 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 IKBIPQ70UQ0 350 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 CEACAM19Q7Z692 300 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 LINC01555Q8NAE3 123 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 PFN4Q8NHR9 129 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 DTD2Q96FN9 168 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 HYLS1Q96M11 299 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 AUNIPQ9H7T9 357 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 NEUROD4Q9HD90 331 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 EIF3KQ9UBQ5 218 aaKnown RBP13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 CACNG2Q9Y698 323 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 SPTBP11277 2137 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 COL4A6Q14031 1691 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 A0A1W2PR48 441 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 J3QLW9 94 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 CHST10O43529 356 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 ATXN8OSP0DMR3 200 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 C6P13671 934 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 ZNF19P17023 458 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 NOS3P29474 1203 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 THBS2P35442 1172 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 PDX1P52945 283 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 SIM1P81133 766 aaPredicted RBP13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 FAAP20Q6NZ36 180 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 FAM92BQ6ZTR7 304 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 KIAA0907Q7Z7F0 614 aaPredicted RBP13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 COMMD7Q86VX2 200 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 SLC39A11Q8N1S5 342 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 GALNT6Q8NCL4 622 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 TRMT10AQ8TBZ6 339 aaKnown RBP13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 NXPE3Q969Y0 559 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 ALG8Q9BVK2 526 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 SLC35C2Q9NQQ7 365 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 TAS2R7Q9NYW3 318 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 AHSPQ9NZD4 102 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 KCNN3Q9UGI6 736 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 UBL4AP11441 157 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 GCGRP47871 477 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 SELENOPP49908 381 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 EXOSC2Q13868 293 aaKnown RBP13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 SLC36A2Q495M3 483 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 CDONQ4KMG0 1287 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 MZT2AQ6P582 158 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 PLEKHM3Q6ZWE6 761 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 METTL3Q86U44 580 aaKnown RBP13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 POGLUT1Q8NBL1 392 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 SUN3Q8TAQ9 357 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 GNPDA2Q8TDQ7 276 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 ARRDC3Q96B67 414 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 GHITMQ9H3K2 345 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 SPHK2Q9NRA0 654 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 C20orf141Q9NUB4 165 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 H2AFY2Q9P0M6 372 aaPredicted RBP13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 SLC7A7Q9UM01 511 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 TMEM5Q9Y2B1 443 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 PLEKHM1Q9Y4G2 1056 aa13.62□□□□□ -0.23
SEMA3F-202ENST00000413852 IGKV1-8A0A0C4DH67 115 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 SGK494L7N484 410 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 ZGLP1P0C6A0 271 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 AHCYP23526 432 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 ATP12AP54707 1039 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 TSPAN31Q12999 210 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 KANSL1Q7Z3B3 1105 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 SERPINA12Q8IW75 414 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 HOMEZQ8IX15 550 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 PIAS4Q8N2W9 510 aaPredicted RBP13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 FBXL6Q8N531 539 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 ZNF527Q8NB42 609 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 THAP4Q8WY91 577 aa13.61□□□□□ -0.23
SEMA3F-202ENST00000413852 CREB3L1Q96BA8 519 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms