RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 NEUROD4Q9HD90 331 aa13.45□□□□□ -0.26
LIMS4-201ENST00000413601 GPATCH2Q9NW75 528 aa13.45□□□□□ -0.26
LIMS4-201ENST00000413601 RPH3AQ9Y2J0 694 aaPredicted RBP13.45□□□□□ -0.26
LIMS4-201ENST00000413601 MRPS18CQ9Y3D5 142 aaKnown RBP13.45□□□□□ -0.26
LIMS4-201ENST00000413601 INTS1Q8N201 2190 aaKnown RBP13.45□□□□□ -0.26
LIMS4-201ENST00000413601 CELSR2Q9HCU4 2923 aa13.45□□□□□ -0.26
LIMS4-201ENST00000413601 TRPC5OSA6NMA1 111 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 GMFGO60234 142 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 TOXO94900 526 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 OXSR1O95747 527 aaPredicted RBP13.44□□□□□ -0.26
LIMS4-201ENST00000413601 ANGPTL1O95841 491 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 PRF1P14222 555 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 COX6B1P14854 86 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 SOAT1P35610 550 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 STARP49675 285 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 DSCR4P56555 118 aaPredicted RBP13.44□□□□□ -0.26
LIMS4-201ENST00000413601 NME5P56597 212 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 PHC1P78364 1004 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 POU6F2P78424 691 aaPredicted RBP13.44□□□□□ -0.26
LIMS4-201ENST00000413601 SRYQ05066 204 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.44□□□□□ -0.26
LIMS4-201ENST00000413601 TTMPQ5BVD1 217 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 RIPPLY2Q5TAB7 128 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 CDC73Q6P1J9 531 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 ANKRD46Q86W74 232 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 LIX1LQ8IVB5 337 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 CLEC4FQ8N1N0 589 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 TNIP2Q8NFZ5 429 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 OR8J2Q8NGG1 315 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 ZNF75CPQ92670 426 aaPredicted RBP13.44□□□□□ -0.26
LIMS4-201ENST00000413601 TESCQ96BS2 214 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 MOAP1Q96BY2 351 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 DTNBP1Q96EV8 351 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 SFXN2Q96NB2 322 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 TRIB1Q96RU8 372 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 STACQ99469 402 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 PIGUQ9H490 435 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 KCNJ16Q9NPI9 418 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 DUSP22Q9NRW4 184 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 FAF1Q9UNN5 650 aaPredicted RBP13.44□□□□□ -0.26
LIMS4-201ENST00000413601 KCNE3Q9Y6H6 103 aa13.44□□□□□ -0.26
LIMS4-201ENST00000413601 UNC79Q9P2D8 2635 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 PKDREJQ9NTG1 2253 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 SLCO1B7G3V0H7 640 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 RNASET2O00584 256 aaKnown RBP13.43□□□□□ -0.26
LIMS4-201ENST00000413601 SCN2BO60939 215 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 CPSF4O95639 269 aaKnown RBP13.43□□□□□ -0.26
LIMS4-201ENST00000413601 CPN1P15169 458 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 HK1P19367 917 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 TBXA2RP21731 343 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 LHX2P50458 406 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 CLNS1AP54105 237 aaKnown RBP13.43□□□□□ -0.26
LIMS4-201ENST00000413601 B3GALT5-AS1P59052 145 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 UFM1P61960 85 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 C17orf67Q0P5P2 114 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 SF3B4Q15427 424 aaKnown RBP eCLIP13.43□□□□□ -0.26
LIMS4-201ENST00000413601 SPANXN4Q5MJ08 99 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 NXNQ6DKJ4 435 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 AAGABQ6PD74 315 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 ENPP6Q6UWR7 440 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 HDXQ7Z353 690 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 SPATA19Q7Z5L4 167 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 LACC1Q8IV20 430 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 GATSQ8NAP1 163 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 OR4A15Q8NGL6 344 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 ADAMTS15Q8TE58 950 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 TEX37Q96LM6 180 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 G6PC3Q9BUM1 346 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 PTGES2Q9H7Z7 377 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 AIG1Q9NVV5 245 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 GIN1Q9NXP7 522 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 PCDHGB4Q9UN71 923 aa13.43□□□□□ -0.26
LIMS4-201ENST00000413601 NAV2Q8IVL1 2488 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 PRSS51A0A1B0GVH4 220 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 HSPB2A8KAH6 182 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 ALG1L2C9J202 215 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 C9JVG2 144 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 FAM47E-STBD1D6RA91 191 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 E9PBE3 544 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 H0Y3Z8 333 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 KLF11O14901 512 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 NDUFB5O43674 189 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 NGFRP08138 427 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 KRT16P08779 473 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 H2AFXP16104 143 aaPredicted RBP13.42□□□□□ -0.26
LIMS4-201ENST00000413601 CHMP24386 653 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 CEACAM8P31997 349 aaPredicted RBP13.42□□□□□ -0.26
LIMS4-201ENST00000413601 S100A3P33764 101 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 RPS26P62854 115 aaKnown RBP13.42□□□□□ -0.26
LIMS4-201ENST00000413601 TFF3Q07654 80 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 RCAN2Q14206 197 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 HSPB2Q16082 182 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 FAM174BQ3ZCQ3 159 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 SLC9B1Q4ZJI4 515 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 ANXA8L1Q5VT79 327 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 NSUN5P2Q63ZY6 315 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 BHLHB9Q6PI77 547 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 MAVSQ7Z434 540 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 C6orf120Q7Z4R8 191 aa13.42□□□□□ -0.26
LIMS4-201ENST00000413601 MCEMP1Q8IX19 187 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms