RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 A0A096LNT2 108 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 POLR3GO15318 223 aaPredicted RBP8.56□□□□□ -1.04
RFFL-203ENST00000413582 ADAM11O75078 769 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 REM1O75628 298 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 BPGMP07738 259 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 SBK3P0C264 359 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 FCGR2AP12318 317 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 CPA3P15088 417 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 PCSK2P16519 638 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 CDKN1AP38936 164 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 FEN1P39748 380 aaKnown RBP8.56□□□□□ -1.04
RFFL-203ENST00000413582 SERPINB4P48594 390 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 PIK3CGP48736 1102 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 PRSS12P56730 875 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 CLDN20P56880 219 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 EEFSECP57772 596 aaKnown RBP8.56□□□□□ -1.04
RFFL-203ENST00000413582 DNAJB13P59910 316 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 MRPS35P82673 323 aaKnown RBP8.56□□□□□ -1.04
RFFL-203ENST00000413582 TRMT12Q53H54 448 aaKnown RBP8.56□□□□□ -1.04
RFFL-203ENST00000413582 C6orf52Q5T4I8 152 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 METTL2BQ6P1Q9 378 aaKnown RBP8.56□□□□□ -1.04
RFFL-203ENST00000413582 NPSR1Q6W5P4 371 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 SLC22A9Q8IVM8 553 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 METTL25Q8N6Q8 603 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 ANKRD42Q8N9B4 389 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 OR6K3Q8NGY3 331 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 DYDC1Q8WWB3 177 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 FBXW5Q969U6 566 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 SERPINI1Q99574 410 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 C19orf24Q9BVV8 132 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 ACTR6Q9GZN1 396 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 ZBTB26Q9HCK0 441 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 PLSCR4Q9NRQ2 329 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 PRODH2Q9UF12 536 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 CDC42EP3Q9UKI2 254 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 ZNF337Q9Y3M9 751 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 ANGPTL3Q9Y5C1 460 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 PCDHA9Q9Y5H5 950 aa8.56□□□□□ -1.04
RFFL-203ENST00000413582 MAGED1Q9Y5V3 778 aaPredicted RBP8.56□□□□□ -1.04
RFFL-203ENST00000413582 OR2M5A3KFT3 312 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 G3V2L1 256 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 H3BML4 177 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 SCO2O43819 266 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 TRIM13O60858 407 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 SHOX2O60902 331 aaPredicted RBP8.55□□□□□ -1.04
RFFL-203ENST00000413582 NDUFS7O75251 213 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 ERAL1O75616 437 aaKnown RBP8.55□□□□□ -1.04
RFFL-203ENST00000413582 KLK1P06870 262 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 CT45A8P0DMV1 189 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 CT45A9P0DMV2 189 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 MYL2P10916 166 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 HK1P19367 917 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 CSNK2A2P19784 350 aaPredicted RBP8.55□□□□□ -1.04
RFFL-203ENST00000413582 ATP5F1P24539 256 aaPredicted RBP8.55□□□□□ -1.04
RFFL-203ENST00000413582 SERPINB5P36952 375 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 SLC6A8P48029 635 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 CORO7P57737 925 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 EFR3AQ14156 821 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 GANABQ14697 944 aaKnown RBP8.55□□□□□ -1.04
RFFL-203ENST00000413582 TUSC1Q2TAM9 212 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 CT45A2Q5DJT8 189 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 ATG16L1Q676U5 607 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 FAM180BQ6P0A1 224 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 ZYG11AQ6WRX3 759 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 LARP4Q71RC2 724 aaKnown RBP eCLIP8.55□□□□□ -1.04
RFFL-203ENST00000413582 GOLGA7Q7Z5G4 137 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 NUDCD3Q8IVD9 361 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 KIRREL3Q8IZU9 778 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 L3MBTL4Q8NA19 623 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 CCDC63Q8NA47 563 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 OR2M3Q8NG83 312 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 OR5M1Q8NGP8 315 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 NEUROG1Q92886 237 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 GTPBP3Q969Y2 492 aaKnown RBP8.55□□□□□ -1.04
RFFL-203ENST00000413582 CNRIP1Q96F85 164 aaPredicted RBP8.55□□□□□ -1.04
RFFL-203ENST00000413582 VSTM2LQ96N03 204 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 MRPL1Q9BYD6 325 aaKnown RBP8.55□□□□□ -1.04
RFFL-203ENST00000413582 OR10A4Q9H209 315 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 DSN1Q9H410 356 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 ANKRA2Q9H9E1 313 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 OXSMQ9NWU1 459 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 PPP4R1LQ9P1A2 415 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 ADAM29Q9UKF5 820 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 LIPT1Q9Y234 373 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 EMC9Q9Y3B6 208 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 RNF11Q9Y3C5 154 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 RNF115Q9Y4L5 304 aa8.55□□□□□ -1.04
RFFL-203ENST00000413582 IGHV4-30-2A0A087WSY4 118 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 C1orf226A1L170 272 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 STX16-NPEPL1H3BU86 382 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 LINC01387J3KSC0 135 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 STX16O14662 325 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 CLOCKO15516 846 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 GPRIN2O60269 458 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 SS18L1O75177 396 aaPredicted RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 SMIM24O75264 130 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 NME6O75414 186 aaPredicted RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 GFAPP14136 432 aa8.54□□□□□ -1.04
RFFL-203ENST00000413582 PSMB1P20618 241 aaKnown RBP8.54□□□□□ -1.04
RFFL-203ENST00000413582 IL12BP29460 328 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms