RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 GALNT15Q8N3T1 639 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 SVOPLQ8N434 492 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 CBR4Q8N4T8 237 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 PACRGLQ8N7B6 248 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 AMER2Q8N7J2 671 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 NLGN4YQ8NFZ3 816 aaPredicted RBP6.14□□□□□ -1.43
VPS41-204ENST00000413141 OR6T1Q8NGN1 323 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 OR8K3Q8NH51 312 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 VANGL1Q8TAA9 524 aaPredicted RBP6.14□□□□□ -1.43
VPS41-204ENST00000413141 NUBPLQ8TB37 319 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 PHF10Q8WUB8 498 aaKnown RBP6.14□□□□□ -1.43
VPS41-204ENST00000413141 ADAMTS14Q8WXS8 1223 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 DNAJC9Q8WXX5 260 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 EFHD2Q96C19 240 aaPredicted RBP6.14□□□□□ -1.43
VPS41-204ENST00000413141 ZNF347Q96SE7 839 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 EPYCQ99645 322 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 PIP5K1AQ99755 562 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 SLC29A1Q99808 456 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 WFDC6Q9BQY6 131 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 NRSN2Q9GZP1 204 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 ZNF700Q9H0M5 742 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 GABARAPL1Q9H0R8 117 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 COQ10BQ9H8M1 238 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 REEP1Q9H902 201 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 C8orf4Q9NR00 106 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 KCND3Q9UK17 655 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 SLC13A4Q9UKG4 626 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 TCFL5Q9UL49 500 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 SLC9A8Q9Y2E8 581 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 C15orf41Q9Y2V0 281 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 TESMINQ9Y4I5 508 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 LYVE1Q9Y5Y7 322 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 AK5Q9Y6K8 562 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 U3KQV3 271 aa6.14□□□□□ -1.43
VPS41-204ENST00000413141 CDC14CA4D256 554 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 CDRT15L2A8MXV6 281 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 G3V2T6 193 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 H0YJX3 145 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 FFAR1O14842 300 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 FRS3O43559 492 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 GFRA3O60609 400 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 TSPAN2O60636 221 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 BCAS1O75363 584 aaPredicted RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 HPRP00739 348 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 RHCEP18577 417 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 FPR1P21462 350 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 CD82P27701 267 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 ABCD3P28288 659 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 IL12BP29460 328 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 LCN1P31025 176 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 DNAJA1P31689 397 aaKnown RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 DLSTP36957 453 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 YAP1P46937 504 aaKnown RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 LIMS1P48059 325 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 HSPA13P48723 471 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 RNF144AP50876 292 aaPredicted RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 NR0B1P51843 470 aaKnown RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 ATP12AP54707 1039 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 CDH12P55289 794 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 RGS8P57771 180 aaPredicted RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 RPS15P62841 145 aaKnown RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 PPP2R2BQ00005 443 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 PLCXD2Q0VAA5 305 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 PPP1R8Q12972 351 aaKnown RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 DNASE1L3Q13609 305 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 GK3PQ14409 553 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 FGFBP1Q14512 234 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 GANABQ14697 944 aaKnown RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 LAPTM4AQ15012 233 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 ZNF141Q15928 474 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 EXT1Q16394 746 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 PPP4R4Q6NUP7 873 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 TCTN3Q6NUS6 607 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 TBPL2Q6SJ96 375 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 IGF2-ASQ6U949 168 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 KIRREL2Q6UWL6 708 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 ZBTB49Q6ZSB9 765 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 TMPRSS7Q7RTY8 843 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 TSPYL5Q86VY4 417 aaPredicted RBP6.13□□□□□ -1.43
VPS41-204ENST00000413141 CYP4Z1Q86W10 505 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 HIPK1Q86Z02 1210 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 PRR22Q8IZ63 422 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 HS3ST5Q8IZT8 346 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 CLIP4Q8N3C7 705 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 GALNT4Q8N4A0 578 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 ZNF614Q8N883 585 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 OR11G2Q8NGC1 345 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 OR4C15Q8NGM1 316 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 OR5K1Q8NHB7 308 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 ELP5Q8TE02 316 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 OIT3Q8WWZ8 545 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 DIO2Q92813 273 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 TP53INP1Q96A56 240 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 SDCCAG3Q96C92 435 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 OMA1Q96E52 524 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 HSPBAP1Q96EW2 488 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 DHRS1Q96LJ7 313 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 ZNF597Q96LX8 424 aa6.13□□□□□ -1.43
VPS41-204ENST00000413141 PRRC1Q96M27 445 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms