RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 DHX34Q14147 1143 aaKnown RBP5.56□□□□□ -1.52
LINC00396-201ENST00000411690 TMEM35AQ53FP2 167 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 TIMM23BQ5SRD1 257 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 HP1BP3Q5SSJ5 553 aaPredicted RBP5.56□□□□□ -1.52
LINC00396-201ENST00000411690 OR4C11Q6IEV9 310 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 FAHD2BQ6P2I3 314 aaPredicted RBP5.56□□□□□ -1.52
LINC00396-201ENST00000411690 KLHL17Q6TDP4 642 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 NUFIP2Q7Z417 695 aaKnown RBP5.56□□□□□ -1.52
LINC00396-201ENST00000411690 PRUNE1Q86TP1 453 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 GGNQ86UU5 652 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 P2RY8Q86VZ1 359 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 SPATA6LQ8N4H0 392 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 ANKS4BQ8N8V4 417 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 FADS6Q8N9I5 356 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 TRIM58Q8NG06 486 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 OR7G1Q8NGA0 311 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 OR10D3Q8NH80 312 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 ZBTB8AQ96BR9 441 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 WDR89Q96FK6 387 aaPredicted RBP5.56□□□□□ -1.52
LINC00396-201ENST00000411690 FAHD2AQ96GK7 314 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 COL21A1Q96P44 957 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 CCT8L2Q96SF2 557 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 CHP1Q99653 195 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 SLC6A7Q99884 636 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 EGFL8Q99944 293 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 SORBS1Q9BX66 1292 aaKnown RBP5.56□□□□□ -1.52
LINC00396-201ENST00000411690 CAPS2Q9BXY5 557 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 MS4A8Q9BY19 250 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 ITPAQ9BY32 194 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 TSGA10Q9BZW7 698 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 PTGES2Q9H7Z7 377 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 NHEJ1Q9H9Q4 299 aaPredicted RBP5.56□□□□□ -1.52
LINC00396-201ENST00000411690 MYNNQ9NPC7 610 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 SMYD2Q9NRG4 433 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 PPP4R1LQ9P1A2 415 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 ZNF490Q9ULM2 529 aaPredicted RBP5.56□□□□□ -1.52
LINC00396-201ENST00000411690 PPIAL4AQ9Y536 164 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 ATP23Q9Y6H3 246 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 CADP27708 2225 aa5.56□□□□□ -1.52
LINC00396-201ENST00000411690 C17orf51A8MQB3 221 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 GOLGA8MH3BSY2 632 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 M0R1B8 84 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 CLGNO14967 610 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 CXCL13O43927 109 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 IPO7O95373 1038 aaKnown RBP5.55□□□□□ -1.52
LINC00396-201ENST00000411690 PABPC4LP0CB38 370 aaKnown RBP5.55□□□□□ -1.52
LINC00396-201ENST00000411690 GGT1P19440 569 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 NT5EP21589 574 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 DRD5P21918 477 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 PIK3R1P27986 724 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 KRT20P35900 424 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 ZNF83P51522 516 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 GAS1P54826 345 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 NAP1L1P55209 391 aaKnown RBP5.55□□□□□ -1.52
LINC00396-201ENST00000411690 SNRPD2P62316 118 aaKnown RBP5.55□□□□□ -1.52
LINC00396-201ENST00000411690 GANABQ14697 944 aaKnown RBP5.55□□□□□ -1.52
LINC00396-201ENST00000411690 TRIP10Q15642 601 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 HIST2H2ACQ16777 129 aaPredicted RBP5.55□□□□□ -1.52
LINC00396-201ENST00000411690 PPP1R3AQ16821 1122 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 MST1LQ2TV78 715 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 GLYR1Q49A26 553 aaPredicted RBP5.55□□□□□ -1.52
LINC00396-201ENST00000411690 HIST2H2AA3Q6FI13 130 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 SLC46A3Q7Z3Q1 461 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 GALNT10Q86SR1 603 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 TDRPQ86YL5 185 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 HOMEZQ8IX15 550 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 TUSC5Q8IXB3 177 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 BPIFB2Q8N4F0 458 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 CEP112Q8N8E3 955 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 CCDC89Q8N998 374 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 OR2M3Q8NG83 312 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 CALML6Q8TD86 181 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 ALG3Q92685 438 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 TMBIM1Q969X1 311 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 TRIM44Q96DX7 344 aaPredicted RBP5.55□□□□□ -1.52
LINC00396-201ENST00000411690 REXO5Q96IC2 774 aaKnown RBP5.55□□□□□ -1.52
LINC00396-201ENST00000411690 LRRC37BQ96QE4 947 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 ADOQ96SZ5 270 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 FKRPQ9H9S5 495 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 WDR41Q9HAD4 459 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 NTN4Q9HB63 628 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 LPAR2Q9HBW0 351 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 ZBTB26Q9HCK0 441 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 GPRC5BQ9NZH0 403 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 MED11Q9P086 117 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 PAK5Q9P286 719 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 SLC17A6Q9P2U8 582 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 BCAP29Q9UHQ4 241 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 FBXO5Q9UKT4 447 aa5.55□□□□□ -1.52
LINC00396-201ENST00000411690 CORO1CQ9ULV4 474 aaPredicted RBP5.55□□□□□ -1.52
LINC00396-201ENST00000411690 LOC105371242A0A075B767 164 aa5.54□□□□□ -1.52
LINC00396-201ENST00000411690 GOLGA6L10A0A0M3HER8 536 aa5.54□□□□□ -1.52
LINC00396-201ENST00000411690 A0A1W2PR48 441 aa5.54□□□□□ -1.52
LINC00396-201ENST00000411690 A0A1W2PS29 197 aa5.54□□□□□ -1.52
LINC00396-201ENST00000411690 OR5H1A6NKK0 313 aa5.54□□□□□ -1.52
LINC00396-201ENST00000411690 ZNF814B7Z6K7 855 aa5.54□□□□□ -1.52
LINC00396-201ENST00000411690 M0QZ24 198 aa5.54□□□□□ -1.52
LINC00396-201ENST00000411690 TNFSF11O14788 317 aa5.54□□□□□ -1.52
LINC00396-201ENST00000411690 SCAMP2O15127 329 aaKnown RBP5.54□□□□□ -1.52
LINC00396-201ENST00000411690 NDUFB5O43674 189 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms