RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 NDUFA13Q9P0J0 144 aa1.06□□□□□ -2.24
RNU2-54P-201ENST00000410299 SPRR3Q9UBC9 169 aa1.06□□□□□ -2.24
RNU2-54P-201ENST00000410299 FBXW2Q9UKT8 454 aa1.06□□□□□ -2.24
RNU2-54P-201ENST00000410299 FZR1Q9UM11 496 aa1.06□□□□□ -2.24
RNU2-54P-201ENST00000410299 SCML2Q9UQR0 700 aa1.06□□□□□ -2.24
RNU2-54P-201ENST00000410299 IFT52Q9Y366 437 aa1.06□□□□□ -2.24
RNU2-54P-201ENST00000410299 SNX5Q9Y5X3 404 aa1.06□□□□□ -2.24
RNU2-54P-201ENST00000410299 CDH10Q9Y6N8 788 aa1.06□□□□□ -2.24
RNU2-54P-201ENST00000410299 GRIN2DO15399 1336 aa1.06□□□□□ -2.24
RNU2-54P-201ENST00000410299 COL1A2P08123 1366 aa1.06□□□□□ -2.24
RNU2-54P-201ENST00000410299 NUP214P35658 2090 aaPredicted RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 IGLV4-69A0A075B6H9 119 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 CCDC69A6NI79 296 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 IMPA2O14732 288 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 TM9SF1O15321 606 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 ZNF264O43296 627 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 PPIHO43447 177 aaKnown RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 TIMM44O43615 452 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 NME2P1O60361 137 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 RAMP1O60894 148 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 STK17BO94768 372 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 PCCAP05165 728 aaPredicted RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 TMOD1P28289 359 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 MARCKSP29966 332 aaPredicted RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 TCF7P36402 384 aaPredicted RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 BTDP43251 543 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 DHPSP49366 369 aaPredicted RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 LHX2P50458 406 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 CCL11P51671 97 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 APOC4P55056 127 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 CASP9P55211 416 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 HERVK_113P61574 105 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 CCZ1BP86790 482 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 CCZ1P86791 482 aaPredicted RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 ROR1Q01973 937 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 PLOD1Q02809 727 aaPredicted RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 ZNF154Q13106 437 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 MADCAM1Q13477 382 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 SCARB2Q14108 478 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 RCN2Q14257 317 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 KARSQ15046 597 aaKnown RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 UBE2V2Q15819 145 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 DNAJC21Q5F1R6 531 aaKnown RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 PAGE3Q5JUK9 113 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 PRAMEF7Q5VXH5 474 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 LIPKQ5VXJ0 399 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 SLX4IPQ5VYV7 408 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 TMEM270Q6UE05 265 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 FAM220AQ7Z4H9 259 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 ZNF429Q86V71 674 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 CCDC36Q8IYA8 594 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 LYPD1Q8N2G4 141 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 FAM71E2Q8N5Q1 922 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 COLGALT1Q8NBJ5 622 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 PHF10Q8WUB8 498 aaKnown RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 BCL2L2Q92843 193 aaPredicted RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 ART4Q93070 314 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 CCDC51Q96ER9 411 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 FUT8Q9BYC5 575 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 TRPV6Q9H1D0 765 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 FAM124BQ9H5Z6 455 aaPredicted RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 CAB39LQ9H9S4 337 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 ANKMY1Q9P2S6 941 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 PHF11Q9UIL8 331 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 ZNF225Q9UK10 706 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 UBQLN1Q9UMX0 589 aaKnown RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 SMC3Q9UQE7 1217 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 EXOSC1Q9Y3B2 195 aaKnown RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 ZMYM6O95789 1325 aa1.05□□□□□ -2.24
RNU2-54P-201ENST00000410299 OTOGLQ3ZCN5 2332 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 IGKV1D-17A0A075B6S4 117 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 IGHV1OR15-1A0A075B7D0 117 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 SMIM28A0A1B0GU29 152 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 A8MUA0 341 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 SERPINE3A8MV23 424 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 H0Y626 953 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 K7N7A8 449 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 ZNF263O14978 683 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 EFNA2O43921 213 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 IGKV1-17P01599 117 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 AREGP15514 252 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 TBPP20226 339 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 AQP1P29972 269 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 NTSP30990 170 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 HPDP32754 393 aaPredicted RBP1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 GCKP35557 465 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 CCR6P51684 374 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 CNN1P51911 297 aaKnown RBP1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 VLDLRP98155 873 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 IL9RQ01113 521 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 SRYQ05066 204 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 ZP4Q12836 540 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 PARP6Q2NL67 630 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 ACSF3Q4G176 576 aaPredicted RBP1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 TOR1AIP1Q5JTV8 583 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 FAM120AOSQ5T036 256 aa1.04□□□□□ -2.24
RNU2-54P-201ENST00000410299 TSPO2Q5TGU0 170 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms