RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 DUSP19Q8WTR2 217 aa21.74■■□□□ 1.07
UBE2E3-202ENST00000410062 C10orf82Q8WW14 230 aa21.74■■□□□ 1.07
UBE2E3-202ENST00000410062 EXO5Q9H790 373 aa21.74■■□□□ 1.07
UBE2E3-202ENST00000410062 UBQLN4Q9NRR5 601 aa21.74■■□□□ 1.07
UBE2E3-202ENST00000410062 EXD2Q9NVH0 621 aa21.74■■□□□ 1.07
UBE2E3-202ENST00000410062 SLAMF8Q9P0V8 285 aa21.74■■□□□ 1.07
UBE2E3-202ENST00000410062 TNFRSF10DQ9UBN6 386 aa21.74■■□□□ 1.07
UBE2E3-202ENST00000410062 ZNF835Q9Y2P0 537 aa21.74■■□□□ 1.07
UBE2E3-202ENST00000410062 PCDHB14Q9Y5E9 798 aa21.74■■□□□ 1.07
UBE2E3-202ENST00000410062 TRGV5A0A0B4J1U4 118 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 TRGV8A0A0C4DH27 118 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 HMGN4O00479 90 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 SEMA7AO75326 666 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 CBR3O75828 277 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 KRT75O95678 551 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 ANGPTL1O95841 491 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 HPGDP15428 266 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 LCN1P31025 176 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 LSP1P33241 339 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 PTGS2P35354 604 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 ARHGAP11BQ3KRB8 267 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 FLYWCH1Q4VC44 716 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 HEPHL1Q6MZM0 1159 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 GATSQ8NAP1 163 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 TPT1P8Q9HAU6 139 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 ACKR4Q9NPB9 350 aa21.73■■□□□ 1.07
UBE2E3-202ENST00000410062 A0A1W2PP18 115 aa21.72■■□□□ 1.07
UBE2E3-202ENST00000410062 ALG1L2C9J202 215 aa21.72■■□□□ 1.07
UBE2E3-202ENST00000410062 AGR2O95994 175 aa21.72■■□□□ 1.07
UBE2E3-202ENST00000410062 HPNP05981 417 aa21.72■■□□□ 1.07
UBE2E3-202ENST00000410062 NGFRP08138 427 aa21.72■■□□□ 1.07
UBE2E3-202ENST00000410062 UBAP2LQ14157 1087 aaKnown RBP21.72■■□□□ 1.07
UBE2E3-202ENST00000410062 C3AR1Q16581 482 aa21.72■■□□□ 1.07
UBE2E3-202ENST00000410062 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.72■■□□□ 1.07
UBE2E3-202ENST00000410062 ATAD3BQ5T9A4 648 aa21.72■■□□□ 1.07
UBE2E3-202ENST00000410062 FAM107BQ9H098 131 aa21.72■■□□□ 1.07
UBE2E3-202ENST00000410062 SDHAF3Q9NRP4 125 aa21.72■■□□□ 1.07
UBE2E3-202ENST00000410062 MED11Q9P086 117 aa21.72■■□□□ 1.07
UBE2E3-202ENST00000410062 TINAGQ9UJW2 476 aa21.72■■□□□ 1.07
UBE2E3-202ENST00000410062 A0A096LPI6 279 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 A0A1B0GVC2 190 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 NPIPA2E9PIF3 369 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 NPIPA3F8WFD2 350 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 SCDO00767 359 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 SUSD5O60279 629 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 FCMRO60667 390 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 AK1P00568 194 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 HOXB9P17482 250 aaPredicted RBP21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 ENDOUP21128 410 aaKnown RBP21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 DCTP40126 519 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 RNF144AP50876 292 aaPredicted RBP21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 MVDP53602 400 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 GNGT1P63211 74 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 FUT5Q11128 374 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 EIPR1Q53HC9 387 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 YRDCQ86U90 279 aaKnown RBP21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 FAM83FQ8NEG4 500 aaPredicted RBP21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 OR4K17Q8NGC6 315 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 DSN1Q9H410 356 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 SAR1AQ9NR31 198 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 COL12A1Q99715 3063 aa21.71■■□□□ 1.07
UBE2E3-202ENST00000410062 PRAMEF27A3QJZ7 478 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 LRRTM2O43300 516 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 NDUFB5O43674 189 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 GMFGO60234 142 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 HCN1O60741 890 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 ZIC2O95409 532 aaPredicted RBP21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 TPOP07202 933 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 GPR68Q15743 365 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 WIPI1Q5MNZ9 446 aaPredicted RBP21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 Q6ZPB1 254 aaPredicted RBP21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 FADS6Q8N9I5 356 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 OR2M3Q8NG83 312 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 NEIL3Q8TAT5 605 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 ROPN1LQ96C74 230 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 ELAC2Q9BQ52 826 aaKnown RBP21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 SLC25A37Q9NYZ2 338 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 SPRR3Q9UBC9 169 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 ERRFI1Q9UJM3 462 aaPredicted RBP21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 MKLN1Q9UL63 735 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 USP9XQ93008 2570 aaPredicted RBP21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 AQP7O14520 342 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 STX11O75558 287 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 CRATP43155 626 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 CA7P43166 264 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 ANXA11P50995 505 aaKnown RBP21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 ATP12AP54707 1039 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 C17orf67Q0P5P2 114 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 LRIF1Q5T3J3 769 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 FJX1Q86VR8 437 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 MSRB3Q8IXL7 192 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 FAM57AQ8TBR7 257 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 ZNF350Q9GZX5 532 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 HOXD1Q9GZZ0 328 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 SLC5A6Q9Y289 635 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 SLC6A5Q9Y345 797 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 NDUFAF1Q9Y375 327 aa21.7■■□□□ 1.06
UBE2E3-202ENST00000410062 PCNX3Q9H6A9 2034 aa21.69■■□□□ 1.06
UBE2E3-202ENST00000410062 BAHCC1Q9P281 2608 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms