RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 RAB21Q9UL25 225 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 PTGDR2Q9Y5Y4 395 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 ACTL7BQ9Y614 415 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 AP4B1Q9Y6B7 739 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 CSMD1Q96PZ7 3565 aa13.17□□□□□ -0.3
NIF3L1-205ENST00000409588 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 A0A1W2PRB8 838 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 FAM221AA4D161 298 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 ALG1L2C9J202 215 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 SCAMP2O15127 329 aaKnown RBP13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 PEX11AO75192 247 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 NME6O75414 186 aaPredicted RBP13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 UTS2O95399 124 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 ANGPTL1O95841 491 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 ALOX5P09917 674 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 HPGDP15428 266 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 HK1P19367 917 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 PRKAG1P54619 331 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 DIO3P55073 304 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 CLDN18P56856 261 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 C21orf58P58505 322 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 EMX2Q04743 252 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 SRYQ05066 204 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 KRT71Q3SY84 523 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 CDH24Q86UP0 819 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 RELL2Q8NC24 303 aaPredicted RBP13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 ACTRT2Q8TDY3 377 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 OR5P2Q8WZ92 322 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 SLC9A6Q92581 669 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 CIDECQ96AQ7 238 aaPredicted RBP13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 GIMAP5Q96F15 307 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 PAQR5Q9NXK6 330 aaPredicted RBP13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 ZDHHC2Q9UIJ5 367 aa13.16□□□□□ -0.3
NIF3L1-205ENST00000409588 A0A1W2PQD3 144 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 TUBAL3A6NHL2 446 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 CLCA1A8K7I4 914 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 HCRTR2O43614 444 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 NDUFB5O43674 189 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 SCO2O43819 266 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 CTAG2O75638 210 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 MYZAPP0CAP1 466 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 EPXP11678 715 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 STARP49675 285 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 B3GALT5-AS1P59052 145 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 KRTAP10-9P60411 292 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 RPS3AP61247 264 aaKnown RBP13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 FLYWCH1Q4VC44 716 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 IL23RQ5VWK5 629 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 MFSD12Q6NUT3 480 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 SPNS3Q6ZMD2 512 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 MARCH3Q86UD3 253 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 TMEM200AQ86VY9 491 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 C9orf106Q8NAJ2 232 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 FNDC5Q8NAU1 212 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 OR56A1Q8NGH5 318 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 NINJ1Q92982 152 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 TUBGCP3Q96CW5 907 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 C1GALT1C1Q96EU7 318 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 BTBD2Q9BX70 525 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 BHLHE41Q9C0J9 482 aaPredicted RBP13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 PIGUQ9H490 435 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 NEUROD4Q9HD90 331 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 ASIC5Q9NY37 505 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 NOP53Q9NZM5 478 aaKnown RBP13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 MED11Q9P086 117 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 CLCF1Q9UBD9 225 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 ZNF175Q9Y473 711 aa13.15□□□□□ -0.3
NIF3L1-205ENST00000409588 DUXAA6NLW8 204 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 TMEM233B4DJY2 109 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 KCNK2O95069 426 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 SERPINE1P05121 402 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 POU3F2P20265 443 aaPredicted RBP13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 CCT3P49368 545 aaKnown RBP13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 ZNF844Q08AG5 666 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 ZNF385BQ569K4 471 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 EXOSC6Q5RKV6 272 aaKnown RBP13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 RAET1LQ5VY80 246 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 ANKRD26P1Q6NSI1 321 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 ZCCHC23Q6ZST2 131 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 CAMKMTQ7Z624 323 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 MTERF4Q7Z6M4 381 aaKnown RBP13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 GRAMD2AQ8IUY3 354 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 RIMKLAQ8IXN7 391 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 SLC16A11Q8NCK7 471 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 PIK3R3Q92569 461 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 ZBTB8AQ96BR9 441 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 FAM120BQ96EK7 910 aaKnown RBP13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 PGM2Q96G03 612 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 RMND5BQ96G75 393 aaPredicted RBP13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 ACTRT3Q9BYD9 372 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 EQTNQ9NQ60 294 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 RASSF1Q9NS23 344 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 ZCCHC3Q9NUD5 404 aaKnown RBP13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 FAF1Q9UNN5 650 aaPredicted RBP13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 RPH3AQ9Y2J0 694 aaPredicted RBP13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 RAP2CQ9Y3L5 183 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 ZNF337Q9Y3M9 751 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 CSMD2Q7Z408 3487 aa13.14□□□□□ -0.31
NIF3L1-205ENST00000409588 GXYLT2A0PJZ3 443 aa13.13□□□□□ -0.31
NIF3L1-205ENST00000409588 C7orf72A4D263 438 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 743.4 ms