RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CA13Q8N1Q1 262 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 TRIML2Q8N7C3 387 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 ANKRD53Q8N9V6 530 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 PSD4Q8NDX1 1056 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 B3GNT7Q8NFL0 401 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 OR2M7Q8NG81 312 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 OR10A6Q8NH74 314 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 ZFP28Q8NHY6 868 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 NT5CQ8TCD5 201 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 NCLNQ969V3 563 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 SMIM10Q96HG1 83 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 IKZF5Q9H5V7 419 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 ZDHHC11Q9H8X9 412 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 DNAJB9Q9UBS3 223 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 SLC22A14Q9Y267 594 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 PCDHGA11Q9Y5H2 935 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 CEPT1Q9Y6K0 416 aa11.7□□□□□ -0.54
CHRNA1-205ENST00000409542 TRBC2A0A5B9 178 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 PRAMEF4O60810 478 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 CELA3AP09093 270 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 GNAO1P09471 354 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 DRD2P14416 443 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 ETS2P15036 469 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 ACVR2AP27037 513 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 TRPC1P48995 793 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 ALDH3A2P51648 485 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 CCR8P51685 355 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 PHC1P78364 1004 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 PLGLB1Q02325 96 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 CHIT1Q13231 466 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 DAG1Q14118 895 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 ZNF750Q32MQ0 723 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 PRAMEF9Q5VWM5 478 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 GRHL2Q6ISB3 625 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 IL20RBQ6UXL0 311 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 SVOPLQ8N434 492 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 TMEM52Q8NDY8 209 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 OR56A3Q8NH54 315 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 CLHC1Q8NHS4 586 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 CYGBQ8WWM9 190 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 FIG4Q92562 907 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 CNPPD1Q9BV87 410 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 TTTY12Q9BZ98 90 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 TIMMDC1Q9NPL8 285 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 PNO1Q9NRX1 252 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 ADGRE2Q9UHX3 823 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 PCDHB14Q9Y5E9 798 aa11.69□□□□□ -0.54
CHRNA1-205ENST00000409542 H0YIV9 168 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 ZNF354AO60765 605 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 OR2J2O76002 312 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 GLSO94925 669 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 MT-ND1P03886 318 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 RNH1P13489 461 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 PRPS1L1P21108 318 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 PTPN6P29350 595 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 SSR4P51571 173 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 NEK2P51955 445 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 PLIN5Q00G26 463 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 IRF8Q02556 426 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 EPS8Q12929 822 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 RUNX2Q13950 521 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 GTDC1Q4AE62 458 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 NOXRED1Q6NXP6 359 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 TRILQ7L0X0 811 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 ABHD13Q7L211 337 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 THOC6Q86W42 341 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 ZNF786Q8N393 782 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 WDR20Q8TBZ3 569 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 MAGEE2Q8TD90 523 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 NEIL2Q969S2 332 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 TMBIM1Q969X1 311 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 FAM162AQ96A26 154 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 NMD3Q96D46 503 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 FAM120BQ96EK7 910 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 SLC47A1Q96FL8 570 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 APIPQ96GX9 242 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 REXO5Q96IC2 774 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 FBXL20Q96IG2 436 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 SH3GL3Q99963 347 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 SLC6A16Q9GZN6 736 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 CLEC4MQ9H2X3 399 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 RASSF1Q9NS23 344 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 DCAF13Q9NV06 445 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 USE1Q9NZ43 259 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 CRIM1Q9NZV1 1036 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 PPIEQ9UNP9 301 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 MAPRE3Q9UPY8 281 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 ERVK-11Q9UQG0 969 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 YARS2Q9Y2Z4 477 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 V9GYQ6 96 aa11.68□□□□□ -0.54
CHRNA1-205ENST00000409542 A0A0G2JN53 185 aa11.67□□□□□ -0.54
CHRNA1-205ENST00000409542 A0A1B0GVC2 190 aa11.67□□□□□ -0.54
CHRNA1-205ENST00000409542 IGHG3P01860 377 aa11.67□□□□□ -0.54
CHRNA1-205ENST00000409542 ALPLP05186 524 aa11.67□□□□□ -0.54
CHRNA1-205ENST00000409542 THRBP10828 461 aa11.67□□□□□ -0.54
CHRNA1-205ENST00000409542 CDH2P19022 906 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-205ENST00000409542 TACR1P25103 407 aa11.67□□□□□ -0.54
CHRNA1-205ENST00000409542 SOX3P41225 446 aa11.67□□□□□ -0.54
CHRNA1-205ENST00000409542 MAGEA5P43359 124 aa11.67□□□□□ -0.54
CHRNA1-205ENST00000409542 CDK9P50750 372 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms