RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 SLC35A4Q96G79 324 aa19.03■□□□□ 0.64
C4orf48-201ENST00000409248 THUMPD3Q9BV44 507 aaKnown RBP19.03■□□□□ 0.64
C4orf48-201ENST00000409248 BTBD2Q9BX70 525 aa19.03■□□□□ 0.64
C4orf48-201ENST00000409248 ZDHHC11Q9H8X9 412 aa19.03■□□□□ 0.64
C4orf48-201ENST00000409248 THUMPD1Q9NXG2 353 aaKnown RBP19.03■□□□□ 0.64
C4orf48-201ENST00000409248 FLNCQ14315 2725 aa19.03■□□□□ 0.64
C4orf48-201ENST00000409248 NUP214P35658 2090 aaPredicted RBP19.02■□□□□ 0.64
C4orf48-201ENST00000409248 C15orf38-AP3S2A0A0A6YYH1 394 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 A0A1B0GUH1 482 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 GXYLT2A0PJZ3 443 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 CCT8L1PA6NM43 557 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 CDC40O60508 579 aaKnown RBP eCLIP19.02■□□□□ 0.64
C4orf48-201ENST00000409248 SLC19A2O60779 497 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 AK1P00568 194 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 C1QCP02747 245 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 OR12D1P0DN82 309 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 ABOP16442 354 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 CALB2P22676 271 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 MASP1P48740 699 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 MVDP53602 400 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 RGNQ15493 299 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 ARPINQ7Z6K5 226 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 PACS2Q86VP3 889 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 TMEM251Q8N6I4 163 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 XAGE5Q8WWM1 108 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 HGDQ93099 445 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 JSRP1Q96MG2 331 aaPredicted RBP19.02■□□□□ 0.64
C4orf48-201ENST00000409248 SLC39A3Q9BRY0 314 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 OSBPL11Q9BXB4 747 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 ANGPTL4Q9BY76 406 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 ZNF703Q9H7S9 590 aaPredicted RBP19.02■□□□□ 0.64
C4orf48-201ENST00000409248 KLRF1Q9NZS2 232 aa19.02■□□□□ 0.64
C4orf48-201ENST00000409248 PRAMEF25A6NGN4 478 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 LRRC3CA6NJW4 275 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 HMGN4O00479 90 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 UGT2B11O75310 529 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 SEMA7AO75326 666 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 ETFAP13804 333 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 CASP3P42574 277 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 RFX3P48380 749 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 MTPNP58546 118 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 DSTNP60981 165 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 MXRA7P84157 204 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 SRSF1Q07955 248 aaKnown RBP eCLIP19.01■□□□□ 0.63
C4orf48-201ENST00000409248 SNTA1Q13424 505 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 NANOGP8Q6NSW7 305 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 SLC30A6Q6NXT4 461 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 ARHGAP11AQ6P4F7 1023 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 C16orf62Q7Z3J2 963 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 RAB8BQ92930 207 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 ADOQ96SZ5 270 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 HOPXQ9BPY8 73 aaPredicted RBP19.01■□□□□ 0.63
C4orf48-201ENST00000409248 NANOGQ9H9S0 305 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 PROK2Q9HC23 129 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 PLSCR2Q9NRY7 297 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 NDE1Q9NXR1 346 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 QPCTLQ9NXS2 382 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 KCNE3Q9Y6H6 103 aa19.01■□□□□ 0.63
C4orf48-201ENST00000409248 TRGV8A0A0C4DH27 118 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 TMEM247A6NEH6 219 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 TSPAN2O60636 221 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 TRIM3O75382 744 aaPredicted RBP19■□□□□ 0.63
C4orf48-201ENST00000409248 UBOX5O94941 541 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 KCNK2O95069 426 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 IL33O95760 270 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 GPX2P18283 190 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 ELAVL4P26378 380 aaKnown RBP19■□□□□ 0.63
C4orf48-201ENST00000409248 MAGEA5P43359 124 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 PNLIPRP2P54317 469 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 HSF1Q00613 529 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 DCST2Q5T1A1 773 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 GCNT6Q5T4J0 391 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 C1QL3Q5VWW1 255 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 BICRALQ6AI39 1079 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 SPPL2CQ8IUH8 684 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 SSC4DQ8WTU2 575 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 EFHD2Q96C19 240 aaPredicted RBP19■□□□□ 0.63
C4orf48-201ENST00000409248 TMEM41AQ96HV5 264 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 G6PC3Q9BUM1 346 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 DEFB127Q9H1M4 99 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 IKZF5Q9H5V7 419 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 P2RX2Q9UBL9 471 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 ERRFI1Q9UJM3 462 aaPredicted RBP19■□□□□ 0.63
C4orf48-201ENST00000409248 LIPT1Q9Y234 373 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 AP3M1Q9Y2T2 418 aa19■□□□□ 0.63
C4orf48-201ENST00000409248 WISP2O76076 250 aa18.99■□□□□ 0.63
C4orf48-201ENST00000409248 ZIC2O95409 532 aaPredicted RBP18.99■□□□□ 0.63
C4orf48-201ENST00000409248 ATP6V1C1P21283 382 aa18.99■□□□□ 0.63
C4orf48-201ENST00000409248 CA7P43166 264 aa18.99■□□□□ 0.63
C4orf48-201ENST00000409248 HPCAP84074 193 aa18.99■□□□□ 0.63
C4orf48-201ENST00000409248 SELPLGQ14242 412 aa18.99■□□□□ 0.63
C4orf48-201ENST00000409248 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.99■□□□□ 0.63
C4orf48-201ENST00000409248 FIGNL1Q6PIW4 674 aa18.99■□□□□ 0.63
C4orf48-201ENST00000409248 Q6ZPB1 254 aaPredicted RBP18.99■□□□□ 0.63
C4orf48-201ENST00000409248 CHDHQ8NE62 594 aaPredicted RBP18.99■□□□□ 0.63
C4orf48-201ENST00000409248 DTNBP1Q96EV8 351 aa18.99■□□□□ 0.63
C4orf48-201ENST00000409248 NODALQ96S42 347 aa18.99■□□□□ 0.63
C4orf48-201ENST00000409248 GPATCH1Q9BRR8 931 aaKnown RBP18.99■□□□□ 0.63
C4orf48-201ENST00000409248 TRIM8Q9BZR9 551 aa18.99■□□□□ 0.63
C4orf48-201ENST00000409248 ZNF835Q9Y2P0 537 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms