RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 IGHG1P01857 330 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 RETP07949 1114 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 ADRA1AP35348 466 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 ACTA2P62736 377 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 ACTG2P63267 376 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 TRA2AQ13595 282 aaKnown RBP eCLIP4.71□□□□□ -1.65
SCN3A-203ENST00000409101 TMEM176BQ3YBM2 270 aaPredicted RBP4.71□□□□□ -1.65
SCN3A-203ENST00000409101 SCGB2B2Q4G0G5 96 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 NKAIN1Q4KMZ8 207 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 AKIRIN2Q53H80 203 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 FAM109BQ6ICB4 259 aaPredicted RBP4.71□□□□□ -1.65
SCN3A-203ENST00000409101 ISCA2Q86U28 154 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 OR51G2Q8NGK0 314 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 OR8K3Q8NH51 312 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 SNRNP27Q8WVK2 155 aaKnown RBP4.71□□□□□ -1.65
SCN3A-203ENST00000409101 TRIB1Q96RU8 372 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 COQ10BQ9H8M1 238 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 NANOGQ9H9S0 305 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 SNTG1Q9NSN8 517 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 TREX1Q9NSU2 369 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 WSB2Q9NYS7 404 aaPredicted RBP4.71□□□□□ -1.65
SCN3A-203ENST00000409101 ACTR3BQ9P1U1 418 aa4.71□□□□□ -1.65
SCN3A-203ENST00000409101 GABRR3A8MPY1 467 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 IL2RAP01589 272 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 ITIH1P19827 911 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 PVALBP20472 110 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 RPL5P46777 297 aaKnown RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 ADAM17P78536 824 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 TMEM174Q8WUU8 243 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 TNFAIP8L1Q8WVP5 186 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 SARAFQ96BY9 339 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 TIMD4Q96H15 378 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 SENP5Q96HI0 755 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 FAM46AQ96IP4 442 aaKnown RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 LCORQ96JN0 433 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 SLC6A16Q9GZN6 736 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 FOLH1BQ9HBA9 442 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 ARNT2Q9HBZ2 717 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 INIPQ9NRY2 104 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 PROCRQ9UNN8 238 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 MARF1Q9Y4F3 1742 aaKnown RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 LOC105369274A0A096LPK9 316 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 PRAMEF25A6NGN4 478 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 E7ESA3 106 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 PDLIM1O00151 329 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 LSM1O15116 133 aaKnown RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 SUSD5O60279 629 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 SCGB1D2O95969 90 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 C8BP07358 591 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 CREB1P16220 341 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 ZNF12P17014 697 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 RPS5P46782 204 aaKnown RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 GCGRP47871 477 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 TRAM1Q15629 374 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 NANOGP8Q6NSW7 305 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 XKR5Q6UX68 686 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 NDUFAF7Q7L592 441 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 AAED1Q7RTV5 226 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 MRPL41Q8IXM3 137 aaKnown RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 OR4N4Q8N0Y3 316 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 TEX26Q8N6G2 289 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 CCDC107Q8WV48 283 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 RSC1A1Q92681 617 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 ZFP3Q96NJ6 502 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 PHF12Q96QT6 1004 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 URM1Q9BTM9 101 aaKnown RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 PAPOLGQ9BWT3 736 aaKnown RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 ZNF701Q9NV72 531 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 ZNF443Q9Y2A4 671 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 NOP16Q9Y3C1 178 aaKnown RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 IGLV3-10A0A075B6K4 115 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 ANTXRLA6NF34 631 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 E7ENX8 843 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 VNN2O95498 520 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 PPP1R3DO95685 299 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 ITGB2P05107 769 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 F8A1P23610 371 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 CD1CP29017 333 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 EIF1P41567 113 aaKnown RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 CAPZBP47756 277 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 NIPAL3Q6P499 406 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 RFLNAQ6ZTI6 216 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 RNF175Q8N4F7 328 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 METTL25Q8N6Q8 603 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 TCEANCQ8N8B7 351 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 OR4K13Q8NH42 304 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 NARS2Q96I59 477 aaKnown RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 SLC46A1Q96NT5 459 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 ULBP2Q9BZM5 246 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 CCDC86Q9H6F5 360 aaKnown RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 C12orf49Q9H741 205 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 METTL8Q9H825 291 aaKnown RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 FBXO4Q9UKT5 387 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 POMPQ9Y244 141 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 MYH8P13535 1937 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 BCORQ6W2J9 1755 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 TEX13DA0A0J9YY54 714 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-203ENST00000409101 LOC100130705A0A1B0GUX0 176 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 FIGNL2A6NMB9 653 aa4.71□□□□□ -1.66
SCN3A-203ENST00000409101 F5H5K5 113 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms