RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ANAPC7Q9UJX3 599 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 PTBP2Q9UKA9 531 aaKnown RBP4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 SPATA2Q9UM82 520 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 MRPS28Q9Y2Q9 187 aaKnown RBP4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 WDR45Q9Y484 360 aa4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 CFAP65Q6ZU64 1925 aaKnown RBP4.03□□□□□ -1.76
HMGB1P13-201ENST00000406019 A0A0U1RQS6 177 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 A0A1W2PNV4 684 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 METTL21EPA6NDL7 271 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 MFSD2BA6NFX1 497 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 H0Y8G0 127 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 NR5A2O00482 541 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 PRRG1O14668 218 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 TFECO14948 347 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 EFNA2O43921 213 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 NEMFO60524 1076 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 NMT2O60551 498 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 RAMP1O60894 148 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 H2AFXP16104 143 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 GDI1P31150 447 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 HSD17B2P37059 387 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 GRIA1P42261 906 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 BRCC3P46736 316 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 GTF2A1P52655 376 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 TMEM50BP56557 158 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 CCNA1P78396 465 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 FKBP3Q00688 224 aaKnown RBP4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 TRDNQ13061 729 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 IDI1Q13907 227 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 EIF2B1Q14232 305 aaKnown RBP4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 ELAVL3Q14576 367 aaKnown RBP4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 ATXN7L3Q14CW9 347 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZNF146Q15072 292 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 UBE2V2Q15819 145 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 MAPK6Q16659 721 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 MOGAT2Q3SYC2 334 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 TMEM52BQ4KMG9 183 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 TSEN54Q7Z6J9 526 aaKnown RBP4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 VSTM4Q8IW00 320 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 SAMD12Q8N8I0 201 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZNF491Q8N8L2 437 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 C18orf25Q96B23 403 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 C11orf24Q96F05 449 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 AMDHD1Q96NU7 426 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 NPY6RQ99463 290 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 LGMNQ99538 433 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 TMEM121Q9BTD3 319 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 TMEM43Q9BTV4 400 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 CRNKL1Q9BZJ0 848 aaKnown RBP4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 TRIM9Q9C026 710 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 STRADBQ9C0K7 418 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 LIME1Q9H400 295 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 MOB1AQ9H8S9 216 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 ESM1Q9NQ30 184 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 RRAGDQ9NQL2 400 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 SMOXQ9NWM0 555 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 MRPL39Q9NYK5 338 aaKnown RBP4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 GNG12Q9UBI6 72 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 CACNG5Q9UF02 275 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 FBXO7Q9Y3I1 522 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 NSD2O96028 1365 aa4.02□□□□□ -1.77
HMGB1P13-201ENST00000406019 SALL1Q9NSC2 1324 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 ARPC4-TTLL3A0A0A6YYG9 625 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 FAM74A7A6NL05 159 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 K7ERI5 159 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 CASKO14936 926 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 STX7O15400 261 aaKnown RBP4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZNF208O43345 1280 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 TYROBPO43914 113 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 ECI2O75521 394 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 IGLV1-44P01699 117 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 FCGR3AP08637 254 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 BCKDHAP12694 445 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 CALML3P27482 149 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 CEBPDP49716 269 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 VEGFCP49767 419 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 EMDP50402 254 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 CCNHP51946 323 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 RPS6P62753 249 aaKnown RBP4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 SRPXP78539 464 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 EWSR1Q01844 656 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZNF33BQ06732 778 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 CALCOCO2Q13137 446 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 RAB35Q15286 201 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 GGTA1PQ4G0N0 100 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 FAM74A3Q4VXF1 159 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 METTL11BQ5VVY1 283 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 BSPRYQ5W0U4 402 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 TMEM225Q6GV28 225 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 FAM71F2Q6NXP2 309 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 FBXL22Q6P050 247 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 STAC2Q6ZMT1 411 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 CYS1Q717R9 158 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 TAS2R42Q7RTR8 314 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 HSD11B1LQ7Z5J1 315 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 TMEM17Q86X19 198 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 METTL4Q8N3J2 472 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 SPERTQ8NA61 448 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 FNDC8Q8TC99 324 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 FBXO32Q969P5 355 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms