RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 CSF3RQ99062 836 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 ITPAQ9BY32 194 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 YTHDF1Q9BYJ9 559 aaKnown RBP8.49□□□□□ -1.05
LIG4-202ENST00000405925 IKZF5Q9H5V7 419 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 ARHGEF9O43307 516 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 HCRTR1O43613 425 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 KRT8P05787 483 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 CD36P16671 472 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 GNALP38405 381 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 FAM53BQ14153 422 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 EFR3AQ14156 821 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 DUSP5Q16690 384 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 MICAQ29983 383 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 LRIF1Q5T3J3 769 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 SLCO6A1Q86UG4 719 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 ZNF676Q8N7Q3 588 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 THEM6Q8WUY1 208 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 DNAJA4Q8WW22 397 aaPredicted RBP8.49□□□□□ -1.05
LIG4-202ENST00000405925 TMEM239Q8WW34 195 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 TAMM41Q96BW9 452 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 ADAD1Q96M93 576 aaKnown RBP8.49□□□□□ -1.05
LIG4-202ENST00000405925 SLC46A1Q96NT5 459 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 PLEKHA1Q9HB21 404 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 SRA1Q9HD15 236 aaKnown RBP8.49□□□□□ -1.05
LIG4-202ENST00000405925 DDX28Q9NUL7 540 aaKnown RBP8.49□□□□□ -1.05
LIG4-202ENST00000405925 TAS2R10Q9NYW0 307 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 CRNNQ9UBG3 495 aaPredicted RBP8.49□□□□□ -1.05
LIG4-202ENST00000405925 ABCD2Q9UBJ2 740 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 CLEC4AQ9UMR7 237 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 CSNK1G3Q9Y6M4 447 aa8.49□□□□□ -1.05
LIG4-202ENST00000405925 C4orf47A7E2U8 309 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 J3QLW9 94 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 ACOT8O14734 319 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 OPN1LWP04000 364 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 NR2C1P13056 603 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 ZNF19P17023 458 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 KCNJ5P48544 419 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 PDX1P52945 283 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 EPHA4P54764 986 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 PIGFQ07326 219 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 MAP4K2Q12851 820 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 MADCAM1Q13477 382 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 ELAVL1Q15717 326 aaKnown RBP8.48□□□□□ -1.05
LIG4-202ENST00000405925 PLK5Q496M5 336 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 MZT2AQ6P582 158 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 CCDC103Q8IW40 242 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 C8orf44Q96CB5 159 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 CNRIP1Q96F85 164 aaPredicted RBP8.48□□□□□ -1.05
LIG4-202ENST00000405925 LCORQ96JN0 433 aaPredicted RBP8.48□□□□□ -1.05
LIG4-202ENST00000405925 SFXN2Q96NB2 322 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 CKLFQ9UBR5 152 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 CACNA1IQ9P0X4 2223 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 NPIPA2E9PIF3 369 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 NPIPA3F8WFD2 350 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 EIF1AYO14602 144 aaKnown RBP8.48□□□□□ -1.05
LIG4-202ENST00000405925 FMO6PO60774 539 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 F10P00742 488 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 C7P10643 843 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 NAA10P41227 235 aaPredicted RBP8.48□□□□□ -1.05
LIG4-202ENST00000405925 ATP12AP54707 1039 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 STARD6P59095 220 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 ST3GAL4Q11206 333 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 COX10Q12887 443 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 NADK2Q4G0N4 442 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 DHRS13Q6UX07 377 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 RPTNQ6XPR3 784 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 MED25Q71SY5 747 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 ATCAYQ86WG3 371 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 CA13Q8N1Q1 262 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 NLGN4YQ8NFZ3 816 aaPredicted RBP8.48□□□□□ -1.05
LIG4-202ENST00000405925 OR7G2Q8NG99 324 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 OR6N2Q8NGY6 317 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 OR4K13Q8NH42 304 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 ACOT11Q8WXI4 607 aaPredicted RBP8.48□□□□□ -1.05
LIG4-202ENST00000405925 MVB12AQ96EY5 273 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 SAMD8Q96LT4 415 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 GPER1Q99527 375 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 GPR52Q9Y2T5 361 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 LOXL2Q9Y4K0 774 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 G3V3Y1 287 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 P2RX6O15547 441 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 CD2P06729 351 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 ZNF28P17035 718 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 MAGEA8P43361 318 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 SLC6A8P48029 635 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 SLC6A9P48067 706 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 GBX2P52951 348 aaPredicted RBP8.48□□□□□ -1.05
LIG4-202ENST00000405925 CTXN1P60606 82 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 ARG2P78540 354 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 ATP1A4Q13733 1029 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 ENTPD8Q5MY95 495 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 RPL13AP3Q6NVV1 102 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 MAMDC2Q7Z304 686 aaPredicted RBP8.48□□□□□ -1.05
LIG4-202ENST00000405925 KMT5CQ86Y97 462 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 FAM86B1Q8N7N1 296 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 COMMD4Q9H0A8 199 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 DUSP15Q9H1R2 295 aaPredicted RBP8.48□□□□□ -1.05
LIG4-202ENST00000405925 CD300AQ9UGN4 299 aa8.48□□□□□ -1.05
LIG4-202ENST00000405925 UTRNP46939 3433 aa8.47□□□□□ -1.05
LIG4-202ENST00000405925 H3BSH0 61 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms