RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 HS6ST1O60243 411 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 BCAS1O75363 584 aaPredicted RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 SOX30O94993 753 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 LGI1O95970 557 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 RPSAP08865 295 aaKnown RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 UBTFL6P0CB48 400 aaPredicted RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 CEACAM1P13688 526 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 RHCEP18577 417 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 IL12BP29460 328 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 RBMS1P29558 406 aaKnown RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 PRKAR1BP31321 381 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 DNAJA1P31689 397 aaKnown RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 RYKP34925 604 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 DLSTP36957 453 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 GPR143P51810 404 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 RNF4P78317 190 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 PLCXD2Q0VAA5 305 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 IQCCQ4KMZ1 466 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 LIN52Q52LA3 116 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 MRPL2Q5T653 305 aaKnown RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 TCTN3Q6NUS6 607 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 CYP4Z1Q86W10 505 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 TMPRSS12Q86WS5 348 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 NLGN4XQ8N0W4 816 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 ESX1Q8N693 406 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 IL22RA1Q8N6P7 574 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 ATG16L2Q8NAA4 619 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 NLGN4YQ8NFZ3 816 aaPredicted RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 OR4C3Q8NH37 302 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 OR5K1Q8NHB7 308 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 CYGBQ8WWM9 190 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 ADIPOR1Q96A54 375 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 PIP5K1AQ99755 562 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 NMNAT1Q9HAN9 279 aaPredicted RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 THSD1Q9NS62 852 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 FLRT3Q9NZU0 649 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 KIF17Q9P2E2 1029 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 TCFL5Q9UL49 500 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 FARSAQ9Y285 508 aaKnown RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 NTNG1Q9Y2I2 539 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 CHST2Q9Y4C5 530 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 PCDHGA3Q9Y5H0 932 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 APC2O95996 2303 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 AKAP13Q12802 2813 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 SYNDIG1LA6NDD5 238 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 FRG2CA6NGY1 282 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 PROB1E7EW31 1015 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 STMND1H3BQB6 276 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 FFAR1O14842 300 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 PCDH17O14917 1159 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 SEMA7AO75326 666 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 PRSS23O95084 383 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 GADD45GO95257 159 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 RASAL1O95294 804 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 DLGAP3O95886 979 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 CELA2AP08217 269 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 NID1P14543 1247 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 POU2F1P14859 743 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 PTNP21246 168 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 CSRP1P21291 193 aaKnown RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 ABCD3P28288 659 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 NRG3P56975 720 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 SLC26A5P58743 744 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 TAS2R41P59536 307 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 EXOC3L2Q2M3D2 409 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 NDUFAF6Q330K2 333 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 PPP4R4Q6NUP7 873 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 TMEM205Q6UW68 189 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 KIRREL2Q6UWL6 708 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 GALNT5Q7Z7M9 940 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 HIPK1Q86Z02 1210 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 SVOPLQ8N434 492 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 APOBEC4Q8WW27 367 aaKnown RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 HOXB13Q92826 284 aaPredicted RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 VMP1Q96GC9 406 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 FNDC11Q9BVV2 318 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 DEFB126Q9BYW3 111 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 SAP130Q9H0E3 1048 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 ARMC7Q9H6L4 198 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 ZNF160Q9HCG1 818 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 ZNF223Q9UK11 482 aaPredicted RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 MRTO4Q9UKD2 239 aaKnown RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 CDV3Q9UKY7 258 aaKnown RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 LRRC42Q9Y546 428 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 LYVE1Q9Y5Y7 322 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 HS3ST3B1Q9Y662 390 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 MRPS18BQ9Y676 258 aaKnown RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 NSG1A0A0A6YYJ2 146 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 DCDC2BA2VCK2 349 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 TTC36A6NLP5 189 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 EIF4E1BA6NMX2 242 aaKnown RBP3.42□□□□□ -1.86
RTN4-208ENST00000404909 AP3D1O14617 1153 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 GFRA3O60609 400 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 DNAJB5O75953 348 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 UTS2O95399 124 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 SNAP29O95721 258 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 PRG2P13727 222 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 FPR1P21462 350 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 DRD5P21918 477 aa3.42□□□□□ -1.86
RTN4-208ENST00000404909 F8A1P23610 371 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms