RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ZNF605Q86T29 641 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 VRK2Q86Y07 508 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 OR1N1Q8NGS0 311 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 MR1Q95460 341 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 RNF31Q96EP0 1072 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 TAAR9Q96RI9 348 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 SPSB2Q99619 263 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 CRB3Q9BUF7 120 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 KCND3Q9UK17 655 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 CBLCQ9ULV8 474 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 DTX4Q9Y2E6 619 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 LYVE1Q9Y5Y7 322 aa19.44■□□□□ 0.7
TPM1-208ENST00000404484 C9orf172C9J069 976 aa19.43■□□□□ 0.7
TPM1-208ENST00000404484 THRBP10828 461 aa19.43■□□□□ 0.7
TPM1-208ENST00000404484 RAD23AP54725 363 aa19.43■□□□□ 0.7
TPM1-208ENST00000404484 CDH12P55289 794 aa19.43■□□□□ 0.7
TPM1-208ENST00000404484 NHSL2Q5HYW2 709 aa19.43■□□□□ 0.7
TPM1-208ENST00000404484 RNF220Q5VTB9 566 aa19.43■□□□□ 0.7
TPM1-208ENST00000404484 HLA-DQA1Q5Y7H0 255 aa19.43■□□□□ 0.7
TPM1-208ENST00000404484 DEF8Q6ZN54 512 aa19.43■□□□□ 0.7
TPM1-208ENST00000404484 SLC29A4Q7RTT9 530 aa19.43■□□□□ 0.7
TPM1-208ENST00000404484 ANKRD37Q7Z713 158 aa19.43■□□□□ 0.7
TPM1-208ENST00000404484 OIT3Q8WWZ8 545 aa19.43■□□□□ 0.7
TPM1-208ENST00000404484 MRTO4Q9UKD2 239 aaKnown RBP19.43■□□□□ 0.7
TPM1-208ENST00000404484 PCDHGA10Q9Y5H3 936 aa19.43■□□□□ 0.7
TPM1-208ENST00000404484 FRG2CA6NGY1 282 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 M0R3H8 397 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 GADD45GO95257 159 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 NID1P14543 1247 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 DRD5P21918 477 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 IFNA8P32881 189 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 HMGA2P52926 109 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 DECR1Q16698 335 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.42■□□□□ 0.7
TPM1-208ENST00000404484 COLEC12Q5KU26 742 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 C6orf52Q5T4I8 152 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 TCTN3Q6NUS6 607 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 LANCL3Q6ZV70 420 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 TAGAPQ8N103 731 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 MARVELD2Q8N4S9 558 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 DHRSXQ8N5I4 330 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 ZNF248Q8NDW4 579 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 PHF10Q8WUB8 498 aaKnown RBP19.42■□□□□ 0.7
TPM1-208ENST00000404484 PMEPA1Q969W9 287 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 ZG16BQ96DA0 208 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 LCORQ96JN0 433 aaPredicted RBP19.42■□□□□ 0.7
TPM1-208ENST00000404484 NR1H4Q96RI1 486 aaPredicted RBP19.42■□□□□ 0.7
TPM1-208ENST00000404484 ADI1Q9BV57 179 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 RSPO3Q9BXY4 272 aaPredicted RBP19.42■□□□□ 0.7
TPM1-208ENST00000404484 PDP1Q9P0J1 537 aaPredicted RBP19.42■□□□□ 0.7
TPM1-208ENST00000404484 FOXJ2Q9P0K8 574 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 KIF17Q9P2E2 1029 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 ACAD8Q9UKU7 415 aa19.42■□□□□ 0.7
TPM1-208ENST00000404484 MAGED1Q9Y5V3 778 aaPredicted RBP19.42■□□□□ 0.7
TPM1-208ENST00000404484 PTPRQQ9UMZ3 2332 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 SAGE2PA6NJ88 616 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 PCDH17O14917 1159 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 RRP8O43159 456 aaKnown RBP19.41■□□□□ 0.7
TPM1-208ENST00000404484 HS6ST1O60243 411 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 CDH2P19022 906 aaPredicted RBP19.41■□□□□ 0.7
TPM1-208ENST00000404484 ITPKBP27987 946 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 YAP1P46937 504 aaKnown RBP19.41■□□□□ 0.7
TPM1-208ENST00000404484 EEF1A1P68104 462 aaKnown RBP19.41■□□□□ 0.7
TPM1-208ENST00000404484 MERTKQ12866 999 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 PPP1R8Q12972 351 aaKnown RBP19.41■□□□□ 0.7
TPM1-208ENST00000404484 FAAH2Q6GMR7 532 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 HMGN2P46Q86SG4 172 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 HS3ST5Q8IZT8 346 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 PIK3C3Q8NEB9 887 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 OR4C15Q8NGM1 316 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 GIPC3Q8TF64 312 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 DHRS1Q96LJ7 313 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 PRRC1Q96M27 445 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 NUDT9Q9BW91 350 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 B3GALT1Q9Y5Z6 326 aa19.41■□□□□ 0.7
TPM1-208ENST00000404484 C2orf92A0A1B0GVN3 265 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 J3KTA2 159 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 DLGAP1O14490 977 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 UGT2B17O75795 530 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 EPPINO95925 133 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 H1F0P07305 194 aaKnown RBP19.4■□□□□ 0.7
TPM1-208ENST00000404484 RPSAP08865 295 aaKnown RBP19.4■□□□□ 0.7
TPM1-208ENST00000404484 IGFBP5P24593 272 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 RGS8P57771 180 aaPredicted RBP19.4■□□□□ 0.7
TPM1-208ENST00000404484 FAM198BQ6UWH4 519 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 ZNF517Q6ZMY9 492 aaPredicted RBP19.4■□□□□ 0.7
TPM1-208ENST00000404484 ZNF836Q6ZNA1 936 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 BCORP1Q8N888 145 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 C17orf47Q8NEP4 570 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 OR4D11Q8NGI4 311 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 OR6T1Q8NGN1 323 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 TFAP2CQ92754 450 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 SMURF2Q9HAU4 748 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 ACER3Q9NUN7 267 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 TMCC3Q9ULS5 477 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 NINQ8N4C6 2090 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 ARRDC5A6NEK1 342 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 H0YAE9 185 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 AP3D1O14617 1153 aa19.4■□□□□ 0.7
TPM1-208ENST00000404484 CNOT3O75175 753 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms