RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 MFSD12Q6NUT3 480 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 ZCCHC12Q6PEW1 402 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 FIGNL1Q6PIW4 674 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 APOOLQ6UXV4 268 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 TMEM200AQ86VY9 491 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 GRAMD2AQ8IUY3 354 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 UBQLNLQ8IYU4 475 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 KRTCAP2Q8N6L1 136 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 NATD1Q8N6N6 113 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 SLC16A11Q8NCK7 471 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 OR5M1Q8NGP8 315 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 OR4C3Q8NH37 302 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 NUDT8Q8WV74 236 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 OR5P2Q8WZ92 322 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 JADE3Q92613 823 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 INTS12Q96CB8 462 aaKnown RBP12.05□□□□□ -0.48
SDF4-203ENST00000403997 GIMAP5Q96F15 307 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 OTUB1Q96FW1 271 aaPredicted RBP12.05□□□□□ -0.48
SDF4-203ENST00000403997 CHMP6Q96FZ7 201 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 C16orf58Q96GQ5 468 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 PPP1R36Q96LQ0 422 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 ZIM3Q96PE6 472 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 SH3GL2Q99962 352 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 SSU72Q9NP77 194 aaKnown RBP12.05□□□□□ -0.48
SDF4-203ENST00000403997 SIRT3Q9NTG7 399 aaPredicted RBP12.05□□□□□ -0.48
SDF4-203ENST00000403997 ZCCHC3Q9NUD5 404 aaKnown RBP12.05□□□□□ -0.48
SDF4-203ENST00000403997 ATAD3AQ9NVI7 634 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 KIAA1549Q9HCM3 1950 aa12.05□□□□□ -0.48
SDF4-203ENST00000403997 CFLARO15519 480 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 NDUFB5O43674 189 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 KCNK2O95069 426 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 RCBTB2O95199 551 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 G6PDP11413 515 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 HPGDP15428 266 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 POU3F2P20265 443 aaPredicted RBP12.04□□□□□ -0.48
SDF4-203ENST00000403997 PRPS1L1P21108 318 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 PEX19P40855 299 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 CCT3P49368 545 aaKnown RBP12.04□□□□□ -0.48
SDF4-203ENST00000403997 DIO3P55073 304 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 FOXF2Q12947 444 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 MAD2L1Q13257 205 aaPredicted RBP12.04□□□□□ -0.48
SDF4-203ENST00000403997 LASP1Q14847 261 aaKnown RBP12.04□□□□□ -0.48
SDF4-203ENST00000403997 PDCD2Q16342 344 aaPredicted RBP12.04□□□□□ -0.48
SDF4-203ENST00000403997 LSM12Q3MHD2 195 aaKnown RBP12.04□□□□□ -0.48
SDF4-203ENST00000403997 FBXL19-AS1Q494R0 122 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 SPDYE7PQ495Y7 208 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 P4HA3Q7Z4N8 544 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 ADGRE4PQ86SQ3 457 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 ZZZ3Q8IYH5 903 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 ZNF781Q8N8C0 355 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 COX18Q8N8Q8 333 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 GOT1L1Q8NHS2 421 aaPredicted RBP12.04□□□□□ -0.48
SDF4-203ENST00000403997 FAM110BQ8TC76 370 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 COQ8BQ96D53 544 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 FAM120BQ96EK7 910 aaKnown RBP12.04□□□□□ -0.48
SDF4-203ENST00000403997 C1GALT1C1Q96EU7 318 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 ZFP3Q96NJ6 502 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 UCN2Q96RP3 112 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 G6PC3Q9BUM1 346 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 FOXD3Q9UJU5 478 aaPredicted RBP12.04□□□□□ -0.48
SDF4-203ENST00000403997 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.04□□□□□ -0.48
SDF4-203ENST00000403997 ZNF337Q9Y3M9 751 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 NUP214P35658 2090 aaPredicted RBP12.04□□□□□ -0.48
SDF4-203ENST00000403997 CSMD1Q96PZ7 3565 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 DOCK7Q96N67 2140 aa12.04□□□□□ -0.48
SDF4-203ENST00000403997 PCNX3Q9H6A9 2034 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 POLQO75417 2590 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 MPDZO75970 2070 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 OR2M5A3KFT3 312 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 H3BML4 177 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 LINC01387J3KSC0 135 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 OXSR1O95747 527 aaPredicted RBP12.03□□□□□ -0.48
SDF4-203ENST00000403997 C6orf47O95873 294 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 HMGN2P05204 90 aaKnown RBP12.03□□□□□ -0.48
SDF4-203ENST00000403997 MYZAPP0CAP1 466 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 DHRS4L1P0CG22 281 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 TBXA2RP21731 343 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 SLC1A6P48664 564 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 CLDN8P56748 225 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 EEFSECP57772 596 aaKnown RBP12.03□□□□□ -0.48
SDF4-203ENST00000403997 POU6F2P78424 691 aaPredicted RBP12.03□□□□□ -0.48
SDF4-203ENST00000403997 EMX2Q04743 252 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 STX3Q13277 289 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.03□□□□□ -0.48
SDF4-203ENST00000403997 PGS1Q32NB8 556 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 GLYR1Q49A26 553 aaPredicted RBP12.03□□□□□ -0.48
SDF4-203ENST00000403997 CCNJQ5T5M9 372 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 ZAR1Q86SH2 424 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 CROCCP2Q86T23 111 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 CDH24Q86UP0 819 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 KIF18BQ86Y91 864 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 GCNT2Q8N0V5 402 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 MEIOBQ8N635 442 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 GATSQ8NAP1 163 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 SMPDL3BQ92485 455 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 PAIP2Q9BPZ3 127 aaKnown RBP12.03□□□□□ -0.48
SDF4-203ENST00000403997 PIGQQ9BRB3 760 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 BTBD2Q9BX70 525 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 C20orf27Q9GZN8 174 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 ACBD3Q9H3P7 528 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms