RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 SDHAF3Q9NRP4 125 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 SIRT3Q9NTG7 399 aaPredicted RBP13.88□□□□□ -0.19
TPM1-207ENST00000403994 PACSIN3Q9UKS6 424 aa13.88□□□□□ -0.19
TPM1-207ENST00000403994 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 OR2M5A3KFT3 312 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 SLC22A20A6NK97 555 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 TMEM114B3SHH9 223 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 H0YC42 278 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 SKAP2O75563 359 aaPredicted RBP13.87□□□□□ -0.19
TPM1-207ENST00000403994 TNFSF13O75888 250 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 OXSR1O95747 527 aaPredicted RBP13.87□□□□□ -0.19
TPM1-207ENST00000403994 ANGPTL1O95841 491 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 PEPDP12955 493 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 CD1EP15812 388 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 MAPK1P28482 360 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 CPA2P48052 419 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 CLK3P49761 638 aaKnown RBP13.87□□□□□ -0.19
TPM1-207ENST00000403994 PRKAG1P54619 331 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 TPD52P55327 224 aaPredicted RBP13.87□□□□□ -0.19
TPM1-207ENST00000403994 CLDN15P56746 228 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 PTGR1Q14914 329 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 DUSP5Q16690 384 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.87□□□□□ -0.19
TPM1-207ENST00000403994 EXOSC6Q5RKV6 272 aaKnown RBP13.87□□□□□ -0.19
TPM1-207ENST00000403994 WDR93Q6P2C0 686 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 R3HCC1LQ7Z5L2 792 aaKnown RBP13.87□□□□□ -0.19
TPM1-207ENST00000403994 ZAR1Q86SH2 424 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 EXOC3L1Q86VI1 746 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 CDC20BQ86Y33 519 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 HOMEZQ8IX15 550 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 SLC16A11Q8NCK7 471 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 OR7A2PQ8NGA2 310 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 OR5M1Q8NGP8 315 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 CEP70Q8NHQ1 597 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 LINC01560Q8TB33 94 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 DUSP19Q8WTR2 217 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 NINJ1Q92982 152 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 OTUB1Q96FW1 271 aaPredicted RBP13.87□□□□□ -0.19
TPM1-207ENST00000403994 PPP3R2Q96LZ3 170 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 C3orf30Q96M34 536 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 PIGQQ9BRB3 760 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 C1orf50Q9BV19 199 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 ROPN1BQ9BZX4 212 aaPredicted RBP13.87□□□□□ -0.19
TPM1-207ENST00000403994 PIGMQ9H3S5 423 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 LIME1Q9H400 295 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 ROPN1Q9HAT0 212 aaPredicted RBP13.87□□□□□ -0.19
TPM1-207ENST00000403994 ATP6V1HQ9UI12 483 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 ST6GALNAC2Q9UJ37 374 aa13.87□□□□□ -0.19
TPM1-207ENST00000403994 ACANP16112 2415 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 ALG1L2C9J202 215 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 H3BML4 177 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 SEC14L5O43304 696 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 EMC8O43402 210 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 TYROBPO43914 113 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 GMFGO60234 142 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 PEX11AO75192 247 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 BPGMP07738 259 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 NGFRP08138 427 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 EPXP11678 715 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 CPOXP36551 454 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 ETV4P43268 484 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 IST1P53990 364 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 DAZAP2Q15038 168 aaPredicted RBP13.86□□□□□ -0.19
TPM1-207ENST00000403994 TMEM44Q2T9K0 475 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 LRIG3Q6UXM1 1119 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 P4HA3Q7Z4N8 544 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 MEIOBQ8N635 442 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 OR6Y1Q8NGX8 325 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 GOT1L1Q8NHS2 421 aaPredicted RBP13.86□□□□□ -0.19
TPM1-207ENST00000403994 FAM120BQ96EK7 910 aaKnown RBP13.86□□□□□ -0.19
TPM1-207ENST00000403994 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.86□□□□□ -0.19
TPM1-207ENST00000403994 ZNF337Q9Y3M9 751 aa13.86□□□□□ -0.19
TPM1-207ENST00000403994 V9GYY5 206 aaPredicted RBP13.86□□□□□ -0.19
TPM1-207ENST00000403994 SHISA8B8ZZ34 492 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 LINC01387J3KSC0 135 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 KCNK2O95069 426 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 CRHP06850 196 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 LAMP1P11279 417 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 ZNF17P17021 662 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 RPL3P39023 403 aaKnown RBP13.85□□□□□ -0.19
TPM1-207ENST00000403994 SUCLG1P53597 346 aaKnown RBP13.85□□□□□ -0.19
TPM1-207ENST00000403994 DIO3P55073 304 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 CLDN20P56880 219 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 C17orf67Q0P5P2 114 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 MLC1Q15049 377 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 GLYR1Q49A26 553 aaPredicted RBP13.85□□□□□ -0.19
TPM1-207ENST00000403994 ATP6AP1LQ52LC2 224 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 OR2A2Q6IF42 318 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 FIGNL1Q6PIW4 674 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 CHMP1BQ7LBR1 199 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 MREGQ8N565 214 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 COX18Q8N8Q8 333 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 OR4C3Q8NH37 302 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 SMPDL3BQ92485 455 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 FIG4Q92562 907 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 JADE3Q92613 823 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 C16orf58Q96GQ5 468 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 PKNOX2Q96KN3 472 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 YIPF4Q9BSR8 244 aa13.85□□□□□ -0.19
TPM1-207ENST00000403994 TMEM109Q9BVC6 243 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms