RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 NUFIP1Q9UHK0 495 aaKnown RBP17.38■□□□□ 0.37
USP48-204ENST00000400301 A3GALT2U3KPV4 340 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 WASHC1A8K0Z3 465 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 A8MVJ9 347 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 KHNYNO15037 678 aaKnown RBP17.38■□□□□ 0.37
USP48-204ENST00000400301 SULT1C4O75897 302 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 BSGP35613 385 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 ARFIP1P53367 373 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 SNRPGP62308 76 aaKnown RBP17.38■□□□□ 0.37
USP48-204ENST00000400301 WASH2PQ6VEQ5 465 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 MFSD9Q8NBP5 474 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 TOR1AIP2Q8NFQ8 470 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 LMX1AQ8TE12 382 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 ZNF443Q9Y2A4 671 aaPredicted RBP17.38■□□□□ 0.37
USP48-204ENST00000400301 IL7P13232 177 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 SOX2P48431 317 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 VWA5B2Q8N398 1253 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 RIT1Q92963 219 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 PTCHD1Q96NR3 888 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 CDADC1Q9BWV3 514 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 BTBD2Q9BX70 525 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 AKIP1Q9NQ31 210 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 STARD5Q9NSY2 213 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 DCST2Q5T1A1 773 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 ARHGAP11AQ6P4F7 1023 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 SLC16A12Q6ZSM3 486 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 ZNF559Q9BR84 538 aa17.38■□□□□ 0.37
USP48-204ENST00000400301 TXNL4BQ9NX01 149 aaKnown RBP17.38■□□□□ 0.37
USP48-204ENST00000400301 PPM1DO15297 605 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 KCNJ8Q15842 424 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 PRSS36Q5K4E3 855 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 SLC48A1Q6P1K1 146 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 SYT14Q8NB59 555 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 THEM6Q8WUY1 208 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 G6PC3Q9BUM1 346 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 RALGAPA2Q2PPJ7 1873 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 YY2O15391 372 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 RDH16O75452 317 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 CD2P06729 351 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 TCEA1P23193 301 aaKnown RBP17.37■□□□□ 0.37
USP48-204ENST00000400301 RPS25P62851 125 aaKnown RBP17.37■□□□□ 0.37
USP48-204ENST00000400301 PRR23CQ6ZRP0 262 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 SLC16A11Q8NCK7 471 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 OR52I1Q8NGK6 324 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 ACOT12Q8WYK0 555 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 BPIFA2Q96DR5 249 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 ELP4Q96EB1 424 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 DNAJA3Q96EY1 480 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 GPR174Q9BXC1 333 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 DIMT1Q9UNQ2 313 aaKnown RBP17.37■□□□□ 0.37
USP48-204ENST00000400301 A0A0G2JMZ2 1700 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 TRBV2A0A0J9YWF9 115 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 A0A1W2PR48 441 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 A0A1W2PRQ8 180 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 CPMP14384 443 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 RPS19P39019 145 aaKnown RBP17.37■□□□□ 0.37
USP48-204ENST00000400301 MAGEA8P43361 318 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 HHEXQ03014 270 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 UBXN2BQ14CS0 331 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 TRAM1Q15629 374 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 HSD17B12Q53GQ0 312 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 C3orf38Q5JPI3 329 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 LIN54Q6MZP7 749 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 FAM111BQ6SJ93 734 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 TNFAIP8L1Q8WVP5 186 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 RNF31Q96EP0 1072 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 CDCA4Q9BXL8 241 aa17.37■□□□□ 0.37
USP48-204ENST00000400301 TRIM64CA6NLI5 447 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 HTR1AP08908 422 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 NLRP8Q86W28 1048 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 LINC00615Q96LM1 132 aaPredicted RBP17.36■□□□□ 0.37
USP48-204ENST00000400301 C1QTNF2Q9BXJ5 285 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 SLC6A17Q9H1V8 727 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 NT5DC2Q9H857 520 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 RNF121Q9H920 327 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 CEP290O15078 2479 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 H0YC42 278 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 NOS1APO75052 506 aaPredicted RBP17.36■□□□□ 0.37
USP48-204ENST00000400301 SEMA4FO95754 770 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 CLEC2LP0C7M8 214 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 PKLRP30613 574 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 GPR143P51810 404 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 PAQR6Q6TCH4 344 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 RASSF6Q6ZTQ3 369 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 SLITRK4Q8IW52 837 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 MS4A15Q8N5U1 240 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 FBRSQ9HAH7 460 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 SGK494L7N484 410 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 HPGDSO60760 199 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 GPX5O75715 221 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 STOMP27105 288 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 GRPRP30550 384 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 PDE7AQ13946 482 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 TMEM31Q5JXX7 168 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 Q6ZSR6 202 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 ZER1Q7Z7L7 766 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 CELF2-AS1Q8N7Q2 184 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 GOT1L1Q8NHS2 421 aaPredicted RBP17.36■□□□□ 0.37
USP48-204ENST00000400301 MS4A6EQ96DS6 147 aa17.36■□□□□ 0.37
USP48-204ENST00000400301 ZNF486Q96H40 463 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms