RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CLSTN3Q9BQT9 956 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 TMEM43Q9BTV4 400 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 RAI2Q9Y5P3 530 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 GRIN2BQ13224 1484 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 RAPGEF6Q8TEU7 1601 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 HIST1H3AP68431 136 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 FDX2Q6P4F2 183 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 TMEM220Q6QAJ8 160 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 BTNL3Q6UXE8 466 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 KIRREL1Q96J84 757 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 PITX2Q99697 317 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF355PQ9NSJ1 428 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 RAB22AQ9UL26 194 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 F5P12259 2224 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 LOC102725191A0A1B0GVB3 256 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 PDGFBP01127 241 aaPredicted RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 CDK4P11802 303 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 CAP1Q01518 475 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 FAM182AQ5T1J6 154 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 PXT1Q8NFP0 134 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 OR2T11Q8NH01 316 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 STYXQ8WUJ0 223 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 LRTOMTQ8WZ04 291 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 RAB37Q96AX2 223 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF281Q9Y2X9 895 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 BMPR1AP36894 532 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 GCNT1Q02742 428 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 CDK13Q14004 1512 aaKnown RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 B4DXG7 233 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 SPATA31C2B4DYI2 1134 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 PCDH7O60245 1069 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 OR2J2O76002 312 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 CDK14O94921 469 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 PPOXP50336 477 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 EFNA3P52797 238 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 GPR68Q15743 365 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 FAM171A1Q5VUB5 890 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 GPR137CQ8N3F9 429 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF738Q8NE65 137 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 SEMA3CQ99985 751 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ARPC5LQ9BPX5 153 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 SLCO5A1Q9H2Y9 848 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ASH2LQ9UBL3 628 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 AK3Q9UIJ7 227 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ZNF536O15090 1300 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 RGS11O94810 467 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 RD3LP0DJH9 198 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 PRAMEF18Q5VWM3 479 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ZIM2Q9NZV7 527 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 CDC42BPGQ6DT37 1551 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 OR5K3A6NET4 321 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 GJA5P36382 358 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 CTSOP43234 321 aaPredicted RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 BAXQ07812 192 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 LAPTM4AQ15012 233 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 SLC14A2Q15849 920 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 ODF4Q2M2E3 257 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 FAM183BPQ6ZVS7 135 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 TRUB1Q8WWH5 349 aaKnown RBP8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 MBOAT4Q96T53 435 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 MS4A12Q9NXJ0 267 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 BABAM2Q9NXR7 383 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 SLC23A2Q9UGH3 650 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 PADI3Q9ULW8 664 aa8.18□□□□□ -1.1
CACNA1C-220ENST00000399655 A8MV72 311 aaPredicted RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SOX1O00570 391 aaPredicted RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 XRCC3O43542 346 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 GLUD1P00367 558 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 ADORA3P0DMS8 318 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 UBL4AP11441 157 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 NDST2P52849 883 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 ADARB1P78563 741 aaKnown RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 GANABQ14697 944 aaKnown RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 OR4A47Q6IF82 309 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 DMBX1Q8NFW5 382 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 OR4A4PQ8NGN8 299 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 NPAS1Q99742 590 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 OR51I2Q9H344 312 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 ERVV-1B6SEH8 477 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 YIF1AO95070 293 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 RHOQP17081 205 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 LRRTM1Q86UE6 522 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 UBALD2Q8IYN6 164 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 PLD6Q8N2A8 252 aaKnown RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 ADAMTS10Q9H324 1103 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 DBNDD1Q9H9R9 158 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 H3BQ06 376 aaPredicted RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 GLI1P08151 1106 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 USP17L7P0C7H9 530 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 FXYD4P59646 89 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 ARHGAP8P85298 464 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 PRR27Q6MZM9 219 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 GDPGP1Q6ZNW5 385 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SGTBQ96EQ0 304 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 C11orf49Q9H6J7 331 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 BCO1Q9HAY6 547 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SCAMP3O14828 347 aaKnown RBP8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 CAPN15O75808 1086 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SLC6A12P48065 614 aa8.17□□□□□ -1.1
CACNA1C-220ENST00000399655 SP2Q02086 613 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms