RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 OTUD3Q5T2D3 398 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 TMEM71Q6P5X7 295 aa5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 CYS1Q717R9 158 aa5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 GALNT10Q86SR1 603 aa5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 ZDHHC23Q8IYP9 409 aa5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 DCP1BQ8IZD4 617 aaKnown RBP5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 ARL14EPQ8N8R7 260 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 OR4L1Q8NH43 312 aa5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 PHOSPHO1Q8TCT1 267 aa5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 LINGO1Q96FE5 620 aa5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 CDKN2AIPNLQ96HQ2 116 aa5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 RAB40CQ96S21 281 aa5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 NMNAT2Q9BZQ4 307 aa5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 SLC6A17Q9H1V8 727 aa5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 BATF3Q9NR55 127 aa5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 MED17Q9NVC6 651 aa5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 MRPL22Q9NWU5 206 aaKnown RBP5.8□□□□□ -1.48
TRAPPC13-202ENST00000399438 LAMA1P25391 3075 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 INPP4BO15327 924 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 ZNF623O75123 536 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 OR4F21O95013 312 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 ZNF205O95201 554 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 C1RP00736 705 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 RHOCP08134 193 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 UQCRBP14927 111 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 CD1DP15813 335 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 NR4A1P22736 598 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 CRABP2P29373 138 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 SLC6A6P31641 620 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 THBS4P35443 961 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 KCNJ3P48549 501 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 MTPNP58546 118 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 RPL15P61313 204 aaKnown RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 HMGCS1Q01581 520 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 GNA12Q03113 381 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 TRAF2Q12933 501 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 BNIP3Q12983 259 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 ELAVL3Q14576 367 aaKnown RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 UGT3A2Q3SY77 523 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 SLC25A53Q5H9E4 307 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 ZNF678Q5SXM1 525 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 ZNF648Q5T619 568 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 OR5M10Q6IEU7 315 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 FIGLAQ6QHK4 219 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 RBM44Q6ZP01 1051 aaKnown RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 GRASPQ7Z6J2 395 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 CATSPERDQ86XM0 798 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 ZNF683Q8IZ20 524 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 GTPBP8Q8N3Z3 284 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 METTL25Q8N6Q8 603 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 ATP6V0D2Q8N8Y2 350 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 KCNG3Q8TAE7 436 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 Q96M66 194 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 PPIL3Q9H2H8 161 aaKnown RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 SLCO5A1Q9H2Y9 848 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 SLC6A13Q9NSD5 602 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 EXD2Q9NVH0 621 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 CD274Q9NZQ7 290 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 SLC45A2Q9UMX9 530 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 SCML2Q9UQR0 700 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 PKP3Q9Y446 797 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 RAI2Q9Y5P3 530 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 F5P12259 2224 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 BCKDKO14874 412 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 B4GAT1O43505 415 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 NRP2O60462 931 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 TBL1XO60907 577 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 SNAPINO95295 136 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 ANXA4P09525 319 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 ZNF37AP17032 561 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 IL12BP29460 328 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 CHI3L1P36222 383 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 ATP5J2P56134 94 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 SEC61GP60059 68 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 NAB1Q13506 487 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 EIF4EBP2Q13542 120 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 NAE1Q13564 534 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 SMN1Q16637 294 aaKnown RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 PAGE3Q5JUK9 113 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 RAET1LQ5VY80 246 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 DUS1LQ6P1R4 473 aaKnown RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 C16orf89Q6UX73 402 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 ZBTB49Q6ZSB9 765 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 PAQR7Q86WK9 346 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 ZNF786Q8N393 782 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 FBXO39Q8N4B4 442 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 OR2T11Q8NH01 316 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 PYCR2Q96C36 320 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 AURKBQ96GD4 344 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 BTN2A3PQ96KV6 586 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 TMEM175Q9BSA9 504 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 SCUBE2Q9NQ36 999 aa5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 AGO1Q9UL18 857 aaKnown RBP5.79□□□□□ -1.48
TRAPPC13-202ENST00000399438 E5RI56 91 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 NME4O00746 187 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 SOCS2O14508 198 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 KMOO15229 486 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 CAPN5O15484 640 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 DUX1O43812 170 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 FKBP6O75344 327 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms