RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 MCATQ8IVS2 390 aaKnown RBP13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 SPEM1Q8N4L4 309 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 SGCZQ96LD1 299 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 TMEM9BQ9NQ34 198 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 DNAJB11Q9UBS4 358 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 NAALAD2Q9Y3Q0 740 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 NPIPA5A0A0B4J1W7 369 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 CLCA1A8K7I4 914 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 NPIPA7E9PJI5 369 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 EEDO75530 441 aaKnown RBP13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 LCATP04180 440 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 NPIPA8P0DM63 369 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 TMEM225BP0DP42 221 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 CD46P15529 392 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 HYAL4Q2M3T9 481 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 SLC18B1Q6NT16 456 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 DCDC5Q6ZRR9 648 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 PAQR9Q6ZVX9 377 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 TRIM46Q7Z4K8 759 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 LMF1Q96S06 567 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 SORBS1Q9BX66 1292 aaKnown RBP13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 SLC6A17Q9H1V8 727 aa13.44□□□□□ -0.26
PCDHA11-201ENST00000398640 SLITRK5O94991 958 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 GKN3PP0CG01 181 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 CD53P19397 219 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 CRISP1P54107 249 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 COMMD6Q7Z4G1 85 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 CBARPQ8N350 705 aaPredicted RBP13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 MDGA1Q8NFP4 955 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 OR5T1Q8NG75 326 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 TREX2Q9BQ50 279 aaPredicted RBP13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 CPNE7Q9UBL6 633 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 ADAMTS6Q9UKP5 1117 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 I3L521 148 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 IGHEP01854 428 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 HTRA4P83105 476 aaPredicted RBP13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 OR7A5Q15622 319 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 NRMQ8IXM6 262 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 OR6C1Q96RD1 312 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 UBE2J1Q9Y385 318 aaPredicted RBP13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 TMEM14AQ9Y6G1 99 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 GJB3O75712 270 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 LAMP1P11279 417 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 RPS3P23396 243 aaKnown RBP eCLIP13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 IL20RBQ6UXL0 311 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 ZNF440Q8IYI8 595 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 TIMM29Q9BSF4 260 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 INPP5KQ9BT40 448 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 ERVK-19Q9WJR5 959 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 TYROBPO43914 113 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 FMO6PO60774 539 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 SORBS2O94875 1100 aaKnown RBP13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 DIRAS3O95661 229 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 LCKP06239 509 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 ZNF182P17025 639 aaPredicted RBP13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 IL32P24001 234 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 CTBSQ01459 385 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 RHEBQ15382 184 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 CFAP77Q6ZQR2 320 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 LINC00696Q6ZRV3 163 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 DPY19L4Q7Z388 723 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 FAM210AQ96ND0 272 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 HSPB11Q9Y547 144 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 SCRG1O75711 98 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 HTR3BO95264 441 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 TNFSF4P23510 183 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 TPMTP51580 245 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 MFSD13AQ14CX5 517 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 ARHGAP12Q8IWW6 846 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 BMFQ96LC9 184 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 ACTRT3Q9BYD9 372 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 GPRC5BQ9NZH0 403 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 SLC7A7Q9UM01 511 aa13.43□□□□□ -0.26
PCDHA11-201ENST00000398640 A0A0G2JPF8 293 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 SHISA7A6NL88 538 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 HNRNPCL3B7ZW38 293 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 ANKRD28O15084 1053 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 IFNA5P01569 189 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 HNRNPCL4P0DMR1 293 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 PTGS2P35354 604 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 ACTA2P62736 377 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 ACTG2P63267 376 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 KANK2Q63ZY3 851 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 PTBP2Q9UKA9 531 aaKnown RBP13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 VIRMAQ69YN4 1812 aaKnown RBP13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 FAM189A1O60320 539 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 TOXO94900 526 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 RAC2P15153 192 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 UGT2B10P36537 528 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 OR1D4P47884 311 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 SH3BP2P78314 561 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 TAP2Q03519 686 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 POU4F2Q12837 409 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 GRHL2Q6ISB3 625 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 MRPL21Q7Z2W9 205 aaKnown RBP13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 SYT14Q8NB59 555 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 EDEM2Q9BV94 578 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 SPO11Q9Y5K1 396 aa13.42□□□□□ -0.26
PCDHA11-201ENST00000398640 SLC22A31A6NKX4 558 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms