RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ZFAND5O76080 213 aa25.34■■□□□ 1.65
CPNE1-203ENST00000397442 SDHBP21912 280 aa25.34■■□□□ 1.65
CPNE1-203ENST00000397442 DCTP40126 519 aa25.34■■□□□ 1.65
CPNE1-203ENST00000397442 PLAURQ03405 335 aa25.34■■□□□ 1.65
CPNE1-203ENST00000397442 PDZK1Q5T2W1 519 aa25.34■■□□□ 1.65
CPNE1-203ENST00000397442 ARHGDIGQ99819 225 aa25.34■■□□□ 1.65
CPNE1-203ENST00000397442 BDH2Q9BUT1 245 aa25.34■■□□□ 1.65
CPNE1-203ENST00000397442 TRIM45Q9H8W5 580 aaPredicted RBP25.34■■□□□ 1.65
CPNE1-203ENST00000397442 ZNF160Q9HCG1 818 aa25.34■■□□□ 1.65
CPNE1-203ENST00000397442 VNN3Q9NY84 501 aa25.34■■□□□ 1.65
CPNE1-203ENST00000397442 FLRT3Q9NZU0 649 aa25.34■■□□□ 1.65
CPNE1-203ENST00000397442 ENPP4Q9Y6X5 453 aa25.34■■□□□ 1.65
CPNE1-203ENST00000397442 MASP2O00187 686 aa25.33■■□□□ 1.65
CPNE1-203ENST00000397442 IFNW1P05000 195 aa25.33■■□□□ 1.65
CPNE1-203ENST00000397442 ATP12AP54707 1039 aa25.33■■□□□ 1.65
CPNE1-203ENST00000397442 LIN52Q52LA3 116 aa25.33■■□□□ 1.65
CPNE1-203ENST00000397442 OR2T5Q6IEZ7 315 aa25.33■■□□□ 1.65
CPNE1-203ENST00000397442 MRGPREQ86SM8 312 aa25.33■■□□□ 1.65
CPNE1-203ENST00000397442 EPHX4Q8IUS5 362 aa25.33■■□□□ 1.65
CPNE1-203ENST00000397442 ICA1LQ8NDH6 482 aa25.33■■□□□ 1.65
CPNE1-203ENST00000397442 OR5L2Q8NGL0 311 aa25.33■■□□□ 1.65
CPNE1-203ENST00000397442 OR2T29Q8NH02 315 aa25.33■■□□□ 1.65
CPNE1-203ENST00000397442 VANGL1Q8TAA9 524 aaPredicted RBP25.33■■□□□ 1.65
CPNE1-203ENST00000397442 ADAMTS17Q8TE56 1095 aa25.33■■□□□ 1.65
CPNE1-203ENST00000397442 OMA1Q96E52 524 aa25.33■■□□□ 1.65
CPNE1-203ENST00000397442 NADKO95544 446 aaPredicted RBP25.32■■□□□ 1.64
CPNE1-203ENST00000397442 VHLP40337 213 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 RNF144AP50876 292 aaPredicted RBP25.32■■□□□ 1.64
CPNE1-203ENST00000397442 PSPHP78330 225 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 PLCXD2Q0VAA5 305 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 RNF220Q5VTB9 566 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 DESI1Q6ICB0 168 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 OR6T1Q8NGN1 323 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 VPS50Q96JG6 964 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 ADOQ96SZ5 270 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 CACYBPQ9HB71 228 aaKnown RBP25.32■■□□□ 1.64
CPNE1-203ENST00000397442 P4HTMQ9NXG6 502 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 MYOTQ9UBF9 498 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 FBXL4Q9UKA2 621 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 MRTO4Q9UKD2 239 aaKnown RBP25.32■■□□□ 1.64
CPNE1-203ENST00000397442 DCHS1Q96JQ0 3298 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 CDHR4A6H8M9 788 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 J3KTA2 159 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 WWP2O00308 870 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 DPM1O60762 260 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 BCAS1O75363 584 aaPredicted RBP25.32■■□□□ 1.64
CPNE1-203ENST00000397442 REM1O75628 298 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 YAP1P46937 504 aaKnown RBP25.32■■□□□ 1.64
CPNE1-203ENST00000397442 IST1P53990 364 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 PSMD4P55036 377 aaKnown RBP25.32■■□□□ 1.64
CPNE1-203ENST00000397442 NPTX1Q15818 432 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 MRPL2Q5T653 305 aaKnown RBP25.32■■□□□ 1.64
CPNE1-203ENST00000397442 TCTN3Q6NUS6 607 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 CIB1Q99828 191 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 DEFB126Q9BYW3 111 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 OAZ3Q9UMX2 235 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 SLC9A8Q9Y2E8 581 aa25.32■■□□□ 1.64
CPNE1-203ENST00000397442 SAC3D1A6NKF1 404 aa25.31■■□□□ 1.64
CPNE1-203ENST00000397442 FRS3O43559 492 aa25.31■■□□□ 1.64
CPNE1-203ENST00000397442 HPP00738 406 aa25.31■■□□□ 1.64
CPNE1-203ENST00000397442 LIPCP11150 499 aa25.31■■□□□ 1.64
CPNE1-203ENST00000397442 ITGA2P17301 1181 aa25.31■■□□□ 1.64
CPNE1-203ENST00000397442 GPN2Q9H9Y4 310 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-203ENST00000397442 EXPH5Q8NEV8 1989 aa25.31■■□□□ 1.64
CPNE1-203ENST00000397442 FFAR1O14842 300 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 DNAJB5O75953 348 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 UTS2O95399 124 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 CYP4B1P13584 511 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 LCN1P31025 176 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 PNLIPRP2P54317 469 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 Q0VFX4 171 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 GRAMD1BQ3KR37 738 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 KLHL26Q53HC5 615 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 EIPR1Q53HC9 387 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 TMEM179BQ7Z7N9 219 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 ZNF605Q86T29 641 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 EME1Q96AY2 570 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 ZNF347Q96SE7 839 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 UBQLN4Q9NRR5 601 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 NPFFR2Q9Y5X5 522 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 AK5Q9Y6K8 562 aa25.3■■□□□ 1.64
CPNE1-203ENST00000397442 TRABD2BA6NFA1 517 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 GNGT2O14610 69 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 PEX1O43933 1283 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 TPST2O60704 377 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 ABCB7O75027 752 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 RHCEP18577 417 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 FUT4P22083 530 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 IL12BP29460 328 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 NRG3P56975 720 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 PPP1R8Q12972 351 aaKnown RBP25.29■■□□□ 1.64
CPNE1-203ENST00000397442 FGFBP1Q14512 234 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 TSPYL5Q86VY4 417 aaPredicted RBP25.29■■□□□ 1.64
CPNE1-203ENST00000397442 KBTBD2Q8IY47 623 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 PIP5K1AQ99755 562 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 HOXD1Q9GZZ0 328 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 KLHL28Q9NXS3 571 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 SLC13A4Q9UKG4 626 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 KLK13Q9UKR3 277 aa25.29■■□□□ 1.64
CPNE1-203ENST00000397442 ICOSLGO75144 302 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms