RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ABCA1O95477 2261 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 A0A087WV62 115 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 GNG14A0A1W2PPG7 69 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 B4DXG7 233 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 H0YC42 278 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 MANBAO00462 879 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 ULK1O75385 1050 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 DEAF1O75398 565 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-208ENST00000397204 KRT6AP02538 564 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 KRT6BP04259 564 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 THBDP07204 575 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 IL3P08700 152 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 RPS17P08708 135 aaKnown RBP7.86□□□□□ -1.15
CAPN3-208ENST00000397204 FCGR2AP12318 317 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 TCEA1P23193 301 aaKnown RBP7.86□□□□□ -1.15
CAPN3-208ENST00000397204 CCKARP32238 428 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 EVI2BP34910 448 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 HSD17B3P37058 310 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 MAGEA12P43365 314 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 KRT6CP48668 564 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 SERPINB9P50453 376 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 NR1H2P55055 460 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 CDH13P55290 713 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 TPD52P55327 224 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-208ENST00000397204 CLDN20P56880 219 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 PON3Q15166 354 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 TRADDQ15628 312 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 SGCBQ16585 318 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 DECR1Q16698 335 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 LETMD1Q6P1Q0 360 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 GALNT18Q6P9A2 607 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 NPSR1Q6W5P4 371 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 METTL25Q8N6Q8 603 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 OR4N2Q8NGD1 307 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 OR9A2Q8NGT5 310 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 OR6K3Q8NGY3 331 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 FNDC9Q8TBE3 224 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 ZNF483Q8TF39 744 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-208ENST00000397204 GFM2Q969S9 779 aaKnown RBP7.86□□□□□ -1.15
CAPN3-208ENST00000397204 EFHD2Q96C19 240 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-208ENST00000397204 ZC3HAV1LQ96H79 300 aaKnown RBP7.86□□□□□ -1.15
CAPN3-208ENST00000397204 BBS4Q96RK4 519 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 OR10A4Q9H209 315 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 RASSF4Q9H2L5 321 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 MRPL46Q9H2W6 279 aaKnown RBP7.86□□□□□ -1.15
CAPN3-208ENST00000397204 ACSS3Q9H6R3 686 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 ANKRA2Q9H9E1 313 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 HHATLQ9HCP6 504 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 FAM120CQ9NX05 1096 aaKnown RBP7.86□□□□□ -1.15
CAPN3-208ENST00000397204 TAS2R7Q9NYW3 318 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 MED11Q9P086 117 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 ZNF225Q9UK10 706 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 MRTO4Q9UKD2 239 aaKnown RBP7.86□□□□□ -1.15
CAPN3-208ENST00000397204 ADAM21Q9UKJ8 722 aa7.86□□□□□ -1.15
CAPN3-208ENST00000397204 IGLV3-32A0A0A0MS00 114 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-208ENST00000397204 MYO1GB0I1T2 1018 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 HS3ST1O14792 307 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 SEC14L5O43304 696 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 SCO2O43819 266 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 COQ9O75208 318 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 NME6O75414 186 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-208ENST00000397204 SLITRK5O94991 958 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 OR4F21O95013 312 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 INHBAP08476 426 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 CTAGE8P0CG41 777 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 GSTM5P46439 218 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 PSMD4P55036 377 aaKnown RBP7.85□□□□□ -1.15
CAPN3-208ENST00000397204 ATP5J2P56134 94 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 RAE1P78406 368 aaKnown RBP7.85□□□□□ -1.15
CAPN3-208ENST00000397204 PSG6Q00889 435 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 CLCQ05315 142 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 C17orf67Q0P5P2 114 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 CSTF3Q12996 717 aaKnown RBP7.85□□□□□ -1.15
CAPN3-208ENST00000397204 RASA2Q15283 850 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 ETFDHQ16134 617 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.85□□□□□ -1.15
CAPN3-208ENST00000397204 EXOC3L2Q2M3D2 409 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 SPIN4Q56A73 249 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 HEPHL1Q6MZM0 1159 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 STAC2Q6ZMT1 411 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 ZNF704Q6ZNC4 412 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-208ENST00000397204 BEND4Q6ZU67 534 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 RPS27LQ71UM5 84 aaKnown RBP7.85□□□□□ -1.15
CAPN3-208ENST00000397204 EXOC3L1Q86VI1 746 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 CTAGE4Q8IX94 777 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 FAM9CQ8IZT9 166 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 OR7G2Q8NG99 324 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 METTL6Q8TCB7 284 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 C16orf78Q8WTQ4 265 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 EXOSC8Q96B26 276 aaKnown RBP7.85□□□□□ -1.15
CAPN3-208ENST00000397204 C1GALT1C1Q96EU7 318 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 C11orf24Q96F05 449 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-208ENST00000397204 GMPPAQ96IJ6 420 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-208ENST00000397204 TMEM204Q9BSN7 226 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 HDHD5Q9BXW7 423 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 FUT8Q9BYC5 575 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 PRRG4Q9BZD6 226 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 GLRX2Q9NS18 164 aa7.85□□□□□ -1.15
CAPN3-208ENST00000397204 SIRT5Q9NXA8 310 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms